Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52646560 ~ 52646800 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585294 | True | 241 | lncRNA | 0.39 | 1 | 52646560 | 52646800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491093 | LOC106572282 | coding | downstream | 28504 | 52606434 ~ 52618106 (-) |
| LOC110492250 | LOC106566852 | coding | downstream | 69417 | 52566433 ~ 52577143 (-) |
| tmem240a | LOC106566854 | coding | downstream | 114335 | 52514283 ~ 52532225 (-) |
| LOC110492247 | LOC106566856 | coding | downstream | 142883 | 52489746 ~ 52503677 (-) |
| atp13a2 | atp13a2 | coding | downstream | 157295 | 52452964 ~ 52489265 (-) |
| rassf11 | LOC106566932 | coding | upstream | 40759 | 52687559 ~ 52692433 (-) |
| LOC118939555 | NA | coding | upstream | 131695 | 52778495 ~ 52780254 (-) |
| LOC110491094 | LOC106566841 | coding | upstream | 157625 | 52804425 ~ 52837293 (-) |
| LOC110491095 | LOC106566922 | coding | upstream | 190928 | 52837728 ~ 52856339 (-) |
| LOC110492261 | LOC106566840 | coding | upstream | 218368 | 52865168 ~ 52874886 (-) |
| G1388044 | NA | non-coding | downstream | 5641 | 52640675 ~ 52640919 (-) |
| G1388036 | NA | non-coding | downstream | 34423 | 52611801 ~ 52612137 (-) |
| G1388025 | LOC106600668 | non-coding | downstream | 48162 | 52598160 ~ 52598398 (-) |
| G1388023 | NA | non-coding | downstream | 52782 | 52593568 ~ 52593778 (-) |
| G1388104 | NA | non-coding | upstream | 92037 | 52738837 ~ 52739737 (-) |
| G1388105 | NA | non-coding | upstream | 92960 | 52739760 ~ 52739987 (-) |
| G1388083 | trim33 | non-coding | upstream | 104960 | 52751760 ~ 52753211 (-) |
| G1388110 | NA | non-coding | upstream | 134808 | 52781608 ~ 52782117 (-) |
| G1388114 | NA | non-coding | upstream | 141450 | 52788250 ~ 52788766 (-) |
| spen | LOC106566857 | other | downstream | 217801 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 656565 | 51978399 ~ 51990025 (-) |
| G1385888 | NA | other | downstream | 1517912 | 51090645 ~ 51128648 (-) |
| G1388236 | NA | other | upstream | 385132 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 1083537 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1897928 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 2338018 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 3177359 | 55824155 ~ 55826646 (-) |
