Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388110 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52781608 ~ 52782117 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585374 | True | 510 | lncRNA | 0.42 | 1 | 52781608 | 52782117 |
52,780,000
52,780,400
52,780,800
52,781,200
52,781,600
52,782,000
52,782,400
52,782,800
52,783,200
52,783,600
52,784,000
52,784,400
52,784,800
NC_048580.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939555 | NA | coding | downstream | 1354 | 52778495 ~ 52780254 (-) |
| rassf11 | LOC106566932 | coding | downstream | 89175 | 52687559 ~ 52692433 (-) |
| LOC110491093 | LOC106572282 | coding | downstream | 163552 | 52606434 ~ 52618106 (-) |
| LOC110492250 | LOC106566852 | coding | downstream | 204465 | 52566433 ~ 52577143 (-) |
| tmem240a | LOC106566854 | coding | downstream | 249383 | 52514283 ~ 52532225 (-) |
| LOC110491094 | LOC106566841 | coding | upstream | 22308 | 52804425 ~ 52837293 (-) |
| LOC110491095 | LOC106566922 | coding | upstream | 55611 | 52837728 ~ 52856339 (-) |
| LOC110492261 | LOC106566840 | coding | upstream | 83051 | 52865168 ~ 52874886 (-) |
| bgna | LOC106566838 | coding | upstream | 98490 | 52880607 ~ 52888213 (-) |
| LOC110492264 | LOC106566837 | coding | upstream | 106277 | 52888394 ~ 52899981 (-) |
| G1388083 | trim33 | non-coding | downstream | 28397 | 52751760 ~ 52753211 (-) |
| G1388105 | NA | non-coding | downstream | 41621 | 52739760 ~ 52739987 (-) |
| G1388104 | NA | non-coding | downstream | 41871 | 52738837 ~ 52739737 (-) |
| G1388050 | NA | non-coding | downstream | 134808 | 52646560 ~ 52646800 (-) |
| G1388044 | NA | non-coding | downstream | 140689 | 52640675 ~ 52640919 (-) |
| G1388114 | NA | non-coding | upstream | 6133 | 52788250 ~ 52788766 (-) |
| G1388115 | NA | non-coding | upstream | 6700 | 52788817 ~ 52789028 (-) |
| G1388137 | NA | non-coding | upstream | 68238 | 52850355 ~ 52850700 (-) |
| G1388147 | NA | non-coding | upstream | 97127 | 52879244 ~ 52879874 (-) |
| spen | LOC106566857 | other | downstream | 352849 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 791613 | 51978399 ~ 51990025 (-) |
| G1385888 | NA | other | downstream | 1652960 | 51090645 ~ 51128648 (-) |
| G1388236 | NA | other | upstream | 249815 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 948220 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1762611 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 2202701 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 3042042 | 55824155 ~ 55826646 (-) |
