XLOC_032894 (si:busm1-105l16.2)


Basic Information

Item Value
gene id XLOC_032894
gene name si:busm1-105l16.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 28339662 ~ 28345002 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063916
attgcatattttcccagtatcatgcagcccaaCCTTAATAaagtcacttcacagcaaaattTCCAGTGTTGTTTGgagttgtttttacagtgtaatttttttttgagttaaaaagtgttatttgtgGTGTTAATTTACGTGACATAAACACCTGCAGTGTACCCTTGTGGTCAGAGTAAGGGTTAATACTGCGAGTTAACATAGTTAACACTATAAACAAGTTGTTTCCATTTCCGGTCGCTTCACCTTACTTCCTCTTTGATTAATGGCGGATGGCACATGGAGAACATTCAAACAGGTAACTGTCATATTACTTATTTAACCACAAATATTCAATACATTTTACATGCTTTATGTTTCtcaatgttaaattaatatttgtaaatattctaACCGAGATTTCAAGTTCTAACCACTTGTCAATTTATACACGACAGACATCTGGAGCCACGAGACAAGCTGCTTTAGCGGGAAAACAAAgtgaaaagcAAATTTGGATTATCAACAACTGCAGATCCTCAAGTTTTCAATGAAATGGACCCTAATGTAGAAGAGGAGATCTTCCACGAGTTAATAGACAGCAGTCCACATTTATGCCTGACTGTTAGATGTTTGGAAGAAAATATTTCTGCTGGCCTGCCTGAGgTGATTTCACCCACAAGATCATCAACAGCCAGCACATGTACTGATACAGTTTCACTCTCTTCAACGGATCATGAAGACCCAGAGCGAAATATGCAGAATCAATTGACAAGGACTAACAGCTGCTTGATAGTAGATGGTAAAGGGCAAAACAGATTGTTCAAGATGCATTGGGAAAGCAATCTGGTGGTGATGAAGTACTTGACGAATACAAGGTCACAAAAACTTAAGGGCCACAGCACTAGACGGCAGCTGGTTAATATTGTCGTCAGTCACATGAAAGAGATTCATGGGAGAATTCCCACGAGCAAGCAACGGGAGACTTATGCTTTGGGCATTATTTCTCTATTTCCCAGCCTGAGAGACCCGTTTTCCGCAAAAGGCTATATTATTCAAGACTTTAGTCTCCTGTTCAATGCTGAAACATCCAACAAGTTGCTTGAGAGGTGGCAGACCGCATTTAAGCACAGGATCATCAATGAGGCGAaatctctgacttcaactgccAGACTTCATTGTCTTATTAATTCAGCAGAAGGACAAGAATCTGAAAATGACTGGGATAATGATGTCATCTGTCCTACTCCTTCTGCATCTCCTACCTCCTTCAGAGAGAAAGAAGACTTAAGATCAGTTCAACAGAGGCCTTTGAAAGACTTGTGCATTTCCATAAGTCTTGCACCAGCATTGAAGACCATCTCAGTGAGAGGAAGGGCCACCAGCCATGTCGCCAAAGATCAGGAAGGATCAAGGGGAGGATTGACCATTTTTATGTGGTTATGGACAAACATCTCATCTCTTGTGCAGCAACCAGGTCCTTGAGTGCTGTTGATGAACTCTTTAAAGACTATGTGTTCAACTTGACGTACGAGGAAGCCCTTGTATACATCTTTACCTTTCTGCAGACTACAGTCTACAACATCGATGTTGGACCTACCAGTTAGTCACCCAGGGTAAAGAAACTGCGTGCAAAGCTTTTACACTAAATGTTTCTTTTACAATAATGTGTTGGTGTTGTCAAAGCTTGCAAGCAAGTAGCACCTCTTTAAGACTCTCACAGTTTTTGATACTGAACATGCTGTACATTTTATGTTGGTTTAACTGTGCGTTTAAGatgcattgttaaaaataaaagtttaaactgGTAAActgttctgatttttttttaactgatcaATGCAAACTGTCCTGTAATGCAGTAAACAATCTATAtaactaaaaatacatttaaatatcaacCTAGGTATGTATGAGCACTATATTATTAGTGTTAAGATGAACACTCTTAGTGTTAAGCTATTAACACTGCGAGTGTAGTTTTAACAtatttactttatgcaaataGGGAAAGTGAGTGGAAAACAGAGAGTTAAAGTCAACACTAGCAGTGCTTTTTTTTAACACTATGCAAGTGTAAAATAATTTACTCTTTTTCAAGTGTAAATTTAACTCGATTTAGTGTGGACCTATATAAACACTAAAGAAGTGTTAATTTTCACACTTTGAGAGTGAAATTAACACTTCAaaatttgctgtgtttttgacaCTAACATAAAGTGATAGTCTGAATGTTCAGAGGCTGAAAACACGATAATGAGTATCAAATATGCTTTATTTATTGAAACTGCACAATTCAAAATTTCAGATTATTATGTTTGATTTGGGGTTtgttttcatcaagtcaaatttatgaCTTTTAAGACCCTTTCAAAAGTAATATGAATTCGATTTTACACTTATACAGAGCTaaataatgagatttttttttttt

Function

symbol description
si:busm1-105l16.2 Predicted to enable microtubule binding activity. Predicted to be active in nucleus. Predicted to colocalize with cytoplasm.

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008017 microtubule binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-108 Predicted to enable microtubule binding activity. Predicted to be active in nucleus. Predicted to colocalize with cytoplasm.

Ensembl:

ensembl_id ENSDARG00000114184

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063916 True 2413 mRNA 0.37 8 28339662 28345002

Neighbor

gene id symbol gene type direction distance location
XLOC_032893 bcl6aa coding downstream 117070 28216487 ~ 28222592 (-)
XLOC_032892 NA coding downstream 209532 28124381 ~ 28130130 (-)
XLOC_032891 si:ch73-194h10.3 coding downstream 221667 28115383 ~ 28117995 (-)
XLOC_032890 NA coding downstream 385061 27938489 ~ 27954601 (-)
XLOC_032889 im:7152348 coding downstream 447701 27884372 ~ 27891961 (-)
XLOC_032895 tbc1d23 coding upstream 569231 28914233 ~ 28943056 (-)
XLOC_032896 tomm70a coding upstream 601039 28946041 ~ 28961660 (-)
XLOC_032897 glmnb coding upstream 625511 28970513 ~ 28980829 (-)
XLOC_032898 NA coding upstream 639015 28984017 ~ 28986397 (-)
XLOC_032899 gfi1ab coding upstream 659060 29004062 ~ 29007493 (-)
XLOC_032887 NA non-coding downstream 716141 27620675 ~ 27623521 (-)
XLOC_032886 NA non-coding downstream 847915 27490737 ~ 27491747 (-)
XLOC_032881 NA non-coding downstream 1301291 27035652 ~ 27038371 (-)
XLOC_032908 NA non-coding upstream 1065224 29410226 ~ 29411285 (-)
XLOC_032910 NA non-coding upstream 1312899 29657901 ~ 29659956 (-)
XLOC_032911 NA non-coding upstream 1405958 29750960 ~ 29752357 (-)
XLOC_032912 NA non-coding upstream 1426365 29771367 ~ 29790125 (-)

Expression


Co-expression Network