Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388249 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53073102 ~ 53073310 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585516 | True | 209 | lncRNA | 0.40 | 1 | 53073102 | 53073310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492271 | ccd22 | coding | downstream | 29627 | 53036097 ~ 53043475 (-) |
| LOC110492270 | LOC100380632 | coding | downstream | 75450 | 52963457 ~ 52997652 (-) |
| LOC110492269 | LOC106566831 | coding | downstream | 111162 | 52950656 ~ 52961940 (-) |
| LOC110492268 | LOC106566834 | coding | downstream | 135413 | 52933104 ~ 52937689 (-) |
| LOC110492267 | LOC107599000 | coding | downstream | 141412 | 52923535 ~ 52931690 (-) |
| LOC110492274 | LOC106566829 | coding | upstream | 24571 | 53097881 ~ 53146173 (-) |
| foxp3-2 | foxp3-2 | coding | upstream | 92194 | 53165504 ~ 53181656 (-) |
| LOC110492276 | LOC106566827 | coding | upstream | 132961 | 53206271 ~ 53211578 (-) |
| LOC110492279 | LOC106566931 | coding | upstream | 140022 | 53213332 ~ 53217735 (-) |
| LOC110492277 | LOC106566826 | coding | upstream | 146063 | 53219373 ~ 53226719 (-) |
| G1388220 | NA | non-coding | downstream | 298 | 53072571 ~ 53072804 (-) |
| G1388238 | NA | non-coding | downstream | 39407 | 53033482 ~ 53033695 (-) |
| G1388234 | NA | non-coding | downstream | 41385 | 53031430 ~ 53031717 (-) |
| G1388173 | NA | non-coding | downstream | 156611 | 52916182 ~ 52916491 (-) |
| G1388172 | NA | non-coding | downstream | 157709 | 52915102 ~ 52915393 (-) |
| G1388265 | NA | non-coding | upstream | 21235 | 53094545 ~ 53097524 (-) |
| G1388328 | NA | non-coding | upstream | 145144 | 53218454 ~ 53218762 (-) |
| G1388333 | NA | non-coding | upstream | 153846 | 53227156 ~ 53227471 (-) |
| G1388351 | NA | non-coding | upstream | 181419 | 53254729 ~ 53254985 (-) |
| G1388352 | NA | non-coding | upstream | 181780 | 53255090 ~ 53255300 (-) |
| G1388236 | NA | other | downstream | 40181 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 500795 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 644343 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1083107 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 1958037 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 657027 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1471418 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1911508 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2750849 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2991193 | 56064503 ~ 56064862 (-) |
