Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388328 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53218454 ~ 53218762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585606 | True | 309 | lncRNA | 0.40 | 1 | 53218454 | 53218762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492279 | LOC106566931 | coding | downstream | 719 | 53213332 ~ 53217735 (-) |
| LOC110492276 | LOC106566827 | coding | downstream | 6876 | 53206271 ~ 53211578 (-) |
| foxp3-2 | foxp3-2 | coding | downstream | 36798 | 53165504 ~ 53181656 (-) |
| LOC110492274 | LOC106566829 | coding | downstream | 72281 | 53097881 ~ 53146173 (-) |
| LOC110492271 | ccd22 | coding | downstream | 174979 | 53036097 ~ 53043475 (-) |
| LOC110492277 | LOC106566826 | coding | upstream | 611 | 53219373 ~ 53226719 (-) |
| LOC110492280 | LOC106566823 | coding | upstream | 45039 | 53263801 ~ 53280585 (-) |
| LOC110492284 | LOC106566930 | coding | upstream | 71244 | 53290006 ~ 53297286 (-) |
| LOC110492285 | tpx2 | coding | upstream | 84579 | 53303341 ~ 53313558 (-) |
| LOC110492286 | LOC106566818 | coding | upstream | 105562 | 53324324 ~ 53376992 (-) |
| G1388265 | NA | non-coding | downstream | 120930 | 53094545 ~ 53097524 (-) |
| G1388249 | NA | non-coding | downstream | 145144 | 53073102 ~ 53073310 (-) |
| G1388220 | NA | non-coding | downstream | 145650 | 53072571 ~ 53072804 (-) |
| G1388238 | NA | non-coding | downstream | 184759 | 53033482 ~ 53033695 (-) |
| G1388234 | NA | non-coding | downstream | 186737 | 53031430 ~ 53031717 (-) |
| G1388333 | NA | non-coding | upstream | 8394 | 53227156 ~ 53227471 (-) |
| G1388351 | NA | non-coding | upstream | 35967 | 53254729 ~ 53254985 (-) |
| G1388352 | NA | non-coding | upstream | 36328 | 53255090 ~ 53255300 (-) |
| G1388354 | LOC106566824 | non-coding | upstream | 37657 | 53256419 ~ 53257688 (-) |
| G1388236 | NA | other | downstream | 185533 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 646147 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 789695 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1228459 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2103389 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 511575 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1325966 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1766056 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2605397 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2845741 | 56064503 ~ 56064862 (-) |
