Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388333 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53227156 ~ 53227471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585619 | True | 316 | lncRNA | 0.33 | 1 | 53227156 | 53227471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492277 | LOC106566826 | coding | downstream | 437 | 53219373 ~ 53226719 (-) |
| LOC110492279 | LOC106566931 | coding | downstream | 9421 | 53213332 ~ 53217735 (-) |
| LOC110492276 | LOC106566827 | coding | downstream | 15578 | 53206271 ~ 53211578 (-) |
| foxp3-2 | foxp3-2 | coding | downstream | 45500 | 53165504 ~ 53181656 (-) |
| LOC110492274 | LOC106566829 | coding | downstream | 80983 | 53097881 ~ 53146173 (-) |
| LOC110492280 | LOC106566823 | coding | upstream | 36330 | 53263801 ~ 53280585 (-) |
| LOC110492284 | LOC106566930 | coding | upstream | 62535 | 53290006 ~ 53297286 (-) |
| LOC110492285 | tpx2 | coding | upstream | 75870 | 53303341 ~ 53313558 (-) |
| LOC110492286 | LOC106566818 | coding | upstream | 96853 | 53324324 ~ 53376992 (-) |
| LOC110491099 | LOC106572329 | coding | upstream | 211521 | 53438992 ~ 53440261 (-) |
| G1388328 | NA | non-coding | downstream | 8394 | 53218454 ~ 53218762 (-) |
| G1388265 | NA | non-coding | downstream | 129632 | 53094545 ~ 53097524 (-) |
| G1388249 | NA | non-coding | downstream | 153846 | 53073102 ~ 53073310 (-) |
| G1388220 | NA | non-coding | downstream | 154352 | 53072571 ~ 53072804 (-) |
| G1388238 | NA | non-coding | downstream | 193461 | 53033482 ~ 53033695 (-) |
| G1388351 | NA | non-coding | upstream | 27258 | 53254729 ~ 53254985 (-) |
| G1388352 | NA | non-coding | upstream | 27619 | 53255090 ~ 53255300 (-) |
| G1388354 | LOC106566824 | non-coding | upstream | 28948 | 53256419 ~ 53257688 (-) |
| G1388375 | NA | non-coding | upstream | 71853 | 53299324 ~ 53299977 (-) |
| G1388236 | NA | other | downstream | 194235 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 654849 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 798397 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1237161 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2112091 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 502866 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1317257 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1757347 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2596688 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2837032 | 56064503 ~ 56064862 (-) |
