XLOC_032896 (tomm70a)


Basic Information

Item Value
gene id XLOC_032896
gene name tomm70a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 28946041 ~ 28961660 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063918
GTGAGTTTGCGCGTTAGCTGGGTGCTGCTGCGTGGATGATGGCTGCATCGAAGCCCGTAGAGCCTCAGTCCGGGAGTGGGCTTCCCCGCTGGCAGCTGGCACTCCTGGTGGGGACTCCGATCGTCCTGGGTGTCGGAGCTGTCTACCTGTGGAATCGAAGTCGCGCCAAGGAAAAGCAGGGGAAAAGGAACGGAGAGAGGAAAACCCCAGAAGGAAGCGCTAGTCCTGTCCAGGGCCAGCACGGTGCGACAAATCCAGAGCTCGAGAACCTGAGTCCCCTCGACCGAGCACAGTCTGCCAAGAATAAAGGCAACAAATACTTCAAGGCTGGCAAATATGATCATGCGATCAAGTGCTATACAGAAGCCATCGGCCTATGtcccaaagaaaaaaaaggagatCTGTCCACCTTCTACCAGAATAGAGCTGCAGCTTATGAGCAACAGaTGAAATGGACCGAAGTGATACAGGATTGCTCTCAGGCAGTTGAGCTGAATCCTCGCTATGTAAAAGCACTTTTCAGGCGTGCCAAGGCACTGGAAAAACTGGATAACAAAAAGGAGTGCTTAGAAGATGTGACGGCTGTATGTATTTTGGAGGTTTTCCAGAACCAGCAAAGTATGCTACTGGCAGACAAGGTGTTGAAACAGCTGGGAAAAGAAAAGGCCAAAGAAAAATACAAGAACCGAGAGCCCCTTATGCCATCTCCTCAGTTCATCAAATCCTACTTTAGCTCCTTTACTGATGACATCATTTCACAACCCCTACAGAAGGGGGAAAAGAAGGACGAAGATAAAGACAAAGAGGGTGAGGCATCAGAGGTCAAAGGAAGCTCAGGCTACCTAAAGGCAAAGCAGTATATGGAGGAGGAGAACTATGATAAGATCATCAGTGAGTGCACAAAGGAGATTGAGTCTGGAGGCAGATACTCTGCTGAAGCTCTTCTGCTGAGAGCCACATTCTACCTGCTGATTGGCAACGCTACAGCTGCACAGCCTGATCTTGACCGTGTCATCAACATGAATGATGCCAGCGTCAAGTTGCGTGCTAATGCCCTCATTAAACGTGGAAGTATGTacatgcagcagcagcagccccAGCTCTCCACGCAGGACTTCAACATGGCTGCAGAGATCGATCACCGTAATGCAGATGTCTATCACCACAGAGGACAGTTGAAGATTCTGCTGGATCAGGTAGAGGAGGCTGTGGGAGATTTTGACGAGTGTATAAAACTTCGACCAGACTCTGCACTTGCCCAGGCACAGAAGTGCTTTGCACTTTACCGACAGGCCTACACTGGAAACAACCCATCTCAGGTTCAGAAAGCCATGGATGGTTTTGAGGATGTCATTAGGAGGTTTCCAAAGTGTGCTGAGGGTTATGCTCTGTATGCACAGGCATTAACTGACCAGCAACAGTTTGGTAAGGCAGATGAAATGTATGATAAATGTATTGAGCTAGAGCCTGACAACGCCACAACATATGTTCATAAAGGTCTGTTGCAGCTTCAGTGGAAACAGGATCTGGAAATGGGTCTTGAACTCATTAGCAAAGCCATTGAAATTGACAATAAATGTGACTTTGCATATGAAACAATGGGAACCATTGAAGTCCAAAGAGGCAACCTGGACAAGGCTATAGACATGTTCAACAAGGCCATTAACTTGGCCAAATCAGAGATGGAGATGGCCCATCTGTATTCCCTCTGTGATGCTGCTTATGCCCAGACAGAGGTGGCCAAGAAGTATGGGCTCAAACCTCCCACGCTATAACTCTTGCTTCCTTTTTCCACTCTCAACTGCCGGGTCAGAATACAAATACCATTATCCCACGTTTTCTTTTGCTTCATTATAAAGATCTTCATTACCAATTAAAAGGAAGTCGGGACAGGTTCTGCTACCACACACTTACCAGTTTTTGAGGACTGGAAGAAAATGATGGGGGAGCAGAAAAAGGAGAtgagaaaaaattaaaaaaa

Function

symbol description
tomm70a Acts upstream of or within ventricular cardiac muscle cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; musculature system; nervous system; and optic vesicle. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human TOMM70 (translocase of outer mitochondrial membrane 70).

GO:

id name namespace
GO:0055015 ventricular cardiac muscle cell development biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8173 Acts upstream of or within ventricular cardiac muscle cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; musculature system; nervous system; and optic vesicle. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human TOMM70 (translocase of outer mitochondrial membrane 70).

Ensembl:

ensembl_id ENSDARG00000029639

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063918 True 1981 mRNA 0.47 12 28946041 28961660

Neighbor

gene id symbol gene type direction distance location
XLOC_032895 tbc1d23 coding downstream 2985 28914233 ~ 28943056 (-)
XLOC_032894 si:busm1-105l16.2 coding downstream 601039 28339662 ~ 28345002 (-)
XLOC_032893 bcl6aa coding downstream 723449 28216487 ~ 28222592 (-)
XLOC_032892 NA coding downstream 815911 28124381 ~ 28130130 (-)
XLOC_032891 si:ch73-194h10.3 coding downstream 828046 28115383 ~ 28117995 (-)
XLOC_032897 glmnb coding upstream 8853 28970513 ~ 28980829 (-)
XLOC_032898 NA coding upstream 22357 28984017 ~ 28986397 (-)
XLOC_032899 gfi1ab coding upstream 42402 29004062 ~ 29007493 (-)
XLOC_032900 evi5b coding upstream 50251 29011911 ~ 29086473 (-)
XLOC_032901 dipk1ab coding upstream 141282 29102942 ~ 29143463 (-)
XLOC_032890 NA non-coding downstream 991440 27938489 ~ 27954601 (-)
XLOC_032887 NA non-coding downstream 1322520 27620675 ~ 27623521 (-)
XLOC_032886 NA non-coding downstream 1454294 27490737 ~ 27491747 (-)
XLOC_032881 NA non-coding downstream 1907670 27035652 ~ 27038371 (-)
XLOC_032908 NA non-coding upstream 448566 29410226 ~ 29411285 (-)
XLOC_032910 NA non-coding upstream 696241 29657901 ~ 29659956 (-)
XLOC_032911 NA non-coding upstream 789300 29750960 ~ 29752357 (-)
XLOC_032912 NA non-coding upstream 809707 29771367 ~ 29790125 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_03342324_03363204 TOMM70, TOMM70A coding CI01000340 null 3342301 ~ 3363619 (-)
bowfin (Amia calva) AMCG00014273 tomm70 coding CM030128.1 CM030128.1 7445016 ~ 7455956 (+)