Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388351 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53254729 ~ 53254985 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585641 | True | 257 | lncRNA | 0.38 | 1 | 53254729 | 53254985 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492277 | LOC106566826 | coding | downstream | 28010 | 53219373 ~ 53226719 (-) |
| LOC110492279 | LOC106566931 | coding | downstream | 36994 | 53213332 ~ 53217735 (-) |
| LOC110492276 | LOC106566827 | coding | downstream | 43151 | 53206271 ~ 53211578 (-) |
| foxp3-2 | foxp3-2 | coding | downstream | 73073 | 53165504 ~ 53181656 (-) |
| LOC110492274 | LOC106566829 | coding | downstream | 108556 | 53097881 ~ 53146173 (-) |
| LOC110492280 | LOC106566823 | coding | upstream | 8816 | 53263801 ~ 53280585 (-) |
| LOC110492284 | LOC106566930 | coding | upstream | 35021 | 53290006 ~ 53297286 (-) |
| LOC110492285 | tpx2 | coding | upstream | 48356 | 53303341 ~ 53313558 (-) |
| LOC110492286 | LOC106566818 | coding | upstream | 69339 | 53324324 ~ 53376992 (-) |
| LOC110491099 | LOC106572329 | coding | upstream | 184007 | 53438992 ~ 53440261 (-) |
| G1388333 | NA | non-coding | downstream | 27258 | 53227156 ~ 53227471 (-) |
| G1388328 | NA | non-coding | downstream | 35967 | 53218454 ~ 53218762 (-) |
| G1388265 | NA | non-coding | downstream | 157205 | 53094545 ~ 53097524 (-) |
| G1388249 | NA | non-coding | downstream | 181419 | 53073102 ~ 53073310 (-) |
| G1388220 | NA | non-coding | downstream | 181925 | 53072571 ~ 53072804 (-) |
| G1388352 | NA | non-coding | upstream | 105 | 53255090 ~ 53255300 (-) |
| G1388354 | LOC106566824 | non-coding | upstream | 1434 | 53256419 ~ 53257688 (-) |
| G1388375 | NA | non-coding | upstream | 44339 | 53299324 ~ 53299977 (-) |
| G1388377 | NA | non-coding | upstream | 47018 | 53302003 ~ 53302208 (-) |
| G1388236 | NA | other | downstream | 221808 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 682422 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 825970 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1264734 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2139664 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 475352 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1289743 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1729833 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2569174 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2809518 | 56064503 ~ 56064862 (-) |
