Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388378 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53302428 ~ 53302760 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585677 | True | 333 | lncRNA | 0.45 | 1 | 53302428 | 53302760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492284 | LOC106566930 | coding | downstream | 5142 | 53290006 ~ 53297286 (-) |
| LOC110492280 | LOC106566823 | coding | downstream | 21843 | 53263801 ~ 53280585 (-) |
| LOC110492277 | LOC106566826 | coding | downstream | 75709 | 53219373 ~ 53226719 (-) |
| LOC110492279 | LOC106566931 | coding | downstream | 84693 | 53213332 ~ 53217735 (-) |
| LOC110492276 | LOC106566827 | coding | downstream | 90850 | 53206271 ~ 53211578 (-) |
| LOC110492285 | tpx2 | coding | upstream | 581 | 53303341 ~ 53313558 (-) |
| LOC110492286 | LOC106566818 | coding | upstream | 21564 | 53324324 ~ 53376992 (-) |
| LOC110491099 | LOC106572329 | coding | upstream | 136232 | 53438992 ~ 53440261 (-) |
| LOC110492292 | LOC106566814 | coding | upstream | 304650 | 53607410 ~ 53617096 (-) |
| LOC110492291 | LOC106566813 | coding | upstream | 314773 | 53617533 ~ 53633437 (-) |
| G1388377 | NA | non-coding | downstream | 220 | 53302003 ~ 53302208 (-) |
| G1388375 | NA | non-coding | downstream | 2451 | 53299324 ~ 53299977 (-) |
| G1388354 | LOC106566824 | non-coding | downstream | 44740 | 53256419 ~ 53257688 (-) |
| G1388352 | NA | non-coding | downstream | 47128 | 53255090 ~ 53255300 (-) |
| G1388381 | NA | non-coding | upstream | 13065 | 53315825 ~ 53316414 (-) |
| G1388393 | NA | non-coding | upstream | 46936 | 53349696 ~ 53350276 (-) |
| G1388394 | NA | non-coding | upstream | 47624 | 53350384 ~ 53350597 (-) |
| G1388364 | NA | non-coding | upstream | 96379 | 53399139 ~ 53406183 (-) |
| G1388406 | NA | non-coding | upstream | 104142 | 53406902 ~ 53407175 (-) |
| G1388236 | NA | other | downstream | 269507 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 730121 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 873669 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1312433 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2187363 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 427577 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1241968 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1682058 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2521399 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2761743 | 56064503 ~ 56064862 (-) |
