Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388407 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53408193 ~ 53408472 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585706 | True | 280 | lncRNA | 0.40 | 1 | 53408193 | 53408472 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492286 | LOC106566818 | coding | downstream | 31201 | 53324324 ~ 53376992 (-) |
| LOC110492285 | tpx2 | coding | downstream | 94635 | 53303341 ~ 53313558 (-) |
| LOC110492284 | LOC106566930 | coding | downstream | 110907 | 53290006 ~ 53297286 (-) |
| LOC110492280 | LOC106566823 | coding | downstream | 127608 | 53263801 ~ 53280585 (-) |
| LOC110492277 | LOC106566826 | coding | downstream | 181474 | 53219373 ~ 53226719 (-) |
| LOC110491099 | LOC106572329 | coding | upstream | 30520 | 53438992 ~ 53440261 (-) |
| LOC110492292 | LOC106566814 | coding | upstream | 198938 | 53607410 ~ 53617096 (-) |
| LOC110492291 | LOC106566813 | coding | upstream | 209061 | 53617533 ~ 53633437 (-) |
| LOC110492293 | LOC106566812 | coding | upstream | 231398 | 53639870 ~ 53666843 (-) |
| LOC110492295 | LOC102779685 | coding | upstream | 269838 | 53678310 ~ 53681048 (-) |
| G1388406 | NA | non-coding | downstream | 1018 | 53406902 ~ 53407175 (-) |
| G1388364 | NA | non-coding | downstream | 2010 | 53399139 ~ 53406183 (-) |
| G1388394 | NA | non-coding | downstream | 57596 | 53350384 ~ 53350597 (-) |
| G1388393 | NA | non-coding | downstream | 57917 | 53349696 ~ 53350276 (-) |
| G1388381 | NA | non-coding | downstream | 91779 | 53315825 ~ 53316414 (-) |
| G1388373 | NA | non-coding | upstream | 11706 | 53420178 ~ 53420392 (-) |
| G1388415 | NA | non-coding | upstream | 19651 | 53428123 ~ 53428663 (-) |
| G1388416 | NA | non-coding | upstream | 20634 | 53429106 ~ 53429493 (-) |
| G1388417 | NA | non-coding | upstream | 21055 | 53429527 ~ 53430526 (-) |
| G1388418 | NA | non-coding | upstream | 22283 | 53430755 ~ 53430985 (-) |
| G1388236 | NA | other | downstream | 375272 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 835886 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 979434 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1418198 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2293128 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 321865 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1136256 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1576346 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2415687 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2656031 | 56064503 ~ 56064862 (-) |
