Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388373 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53420178 ~ 53420392 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585672 | True | 215 | lncRNA | 0.40 | 1 | 53420178 | 53420392 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492286 | LOC106566818 | coding | downstream | 43186 | 53324324 ~ 53376992 (-) |
| LOC110492285 | tpx2 | coding | downstream | 106620 | 53303341 ~ 53313558 (-) |
| LOC110492284 | LOC106566930 | coding | downstream | 122892 | 53290006 ~ 53297286 (-) |
| LOC110492280 | LOC106566823 | coding | downstream | 139593 | 53263801 ~ 53280585 (-) |
| LOC110492277 | LOC106566826 | coding | downstream | 193459 | 53219373 ~ 53226719 (-) |
| LOC110491099 | LOC106572329 | coding | upstream | 18600 | 53438992 ~ 53440261 (-) |
| LOC110492292 | LOC106566814 | coding | upstream | 187018 | 53607410 ~ 53617096 (-) |
| LOC110492291 | LOC106566813 | coding | upstream | 197141 | 53617533 ~ 53633437 (-) |
| LOC110492293 | LOC106566812 | coding | upstream | 219478 | 53639870 ~ 53666843 (-) |
| LOC110492295 | LOC102779685 | coding | upstream | 257918 | 53678310 ~ 53681048 (-) |
| G1388407 | NA | non-coding | downstream | 11706 | 53408193 ~ 53408472 (-) |
| G1388406 | NA | non-coding | downstream | 13003 | 53406902 ~ 53407175 (-) |
| G1388364 | NA | non-coding | downstream | 13995 | 53399139 ~ 53406183 (-) |
| G1388394 | NA | non-coding | downstream | 69581 | 53350384 ~ 53350597 (-) |
| G1388393 | NA | non-coding | downstream | 69902 | 53349696 ~ 53350276 (-) |
| G1388415 | NA | non-coding | upstream | 7731 | 53428123 ~ 53428663 (-) |
| G1388416 | NA | non-coding | upstream | 8714 | 53429106 ~ 53429493 (-) |
| G1388417 | NA | non-coding | upstream | 9135 | 53429527 ~ 53430526 (-) |
| G1388418 | NA | non-coding | upstream | 10363 | 53430755 ~ 53430985 (-) |
| G1388421 | NA | non-coding | upstream | 11876 | 53432268 ~ 53432737 (-) |
| G1388236 | NA | other | downstream | 387257 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 847871 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 991419 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1430183 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2305113 | 51113403 ~ 51117850 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 309945 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1124336 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1564426 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2403767 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2644111 | 56064503 ~ 56064862 (-) |
