Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388516 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53562974 ~ 53626438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585857 | True | 220 | lncRNA | 0.54 | 2 | 53562974 | 53626438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491099 | LOC106572329 | coding | downstream | 122713 | 53438992 ~ 53440261 (-) |
| LOC110492286 | LOC106566818 | coding | downstream | 185982 | 53324324 ~ 53376992 (-) |
| LOC110492285 | tpx2 | coding | downstream | 249416 | 53303341 ~ 53313558 (-) |
| LOC110492284 | LOC106566930 | coding | downstream | 265688 | 53290006 ~ 53297286 (-) |
| LOC110492280 | LOC106566823 | coding | downstream | 282389 | 53263801 ~ 53280585 (-) |
| LOC110492293 | LOC106566812 | coding | upstream | 13432 | 53639870 ~ 53666843 (-) |
| LOC110492295 | LOC102779685 | coding | upstream | 51872 | 53678310 ~ 53681048 (-) |
| LOC110492296 | LOC106566808 | coding | upstream | 62734 | 53689172 ~ 53695764 (-) |
| LOC110491101 | LOC106566920 | coding | upstream | 85432 | 53711870 ~ 53727973 (-) |
| LOC110492299 | LOC106566805 | coding | upstream | 103726 | 53730164 ~ 53757019 (-) |
| G1388482 | NA | non-coding | downstream | 43103 | 53519349 ~ 53519871 (-) |
| G1388481 | NA | non-coding | downstream | 43714 | 53518199 ~ 53519260 (-) |
| G1388453 | NA | non-coding | downstream | 60837 | 53501766 ~ 53502137 (-) |
| G1388454 | NA | non-coding | downstream | 63093 | 53498524 ~ 53499881 (-) |
| G1388466 | LOC106572237 | non-coding | downstream | 65708 | 53494485 ~ 53497266 (-) |
| G1388532 | LOC106566810 | non-coding | upstream | 43280 | 53669718 ~ 53671690 (-) |
| G1388578 | NA | non-coding | upstream | 57480 | 53683918 ~ 53684208 (-) |
| G1388583 | NA | non-coding | upstream | 76562 | 53703000 ~ 53703266 (-) |
| G1388597 | NA | non-coding | upstream | 94245 | 53720683 ~ 53721152 (-) |
| G1388236 | NA | other | downstream | 530053 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 990667 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1134215 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1572979 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2447909 | 51113403 ~ 51117850 (-) |
| G1389763 | NA | other | upstream | 918290 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1358380 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2197721 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2438065 | 56064503 ~ 56064862 (-) |
