Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388532 |
| gene name | LOC106566810 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53669718 ~ 53671690 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein RCC2 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585877 | True | 532 | lncRNA | 0.49 | 4 | 53669718 | 53671690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492293 | LOC106566812 | coding | downstream | 2875 | 53639870 ~ 53666843 (-) |
| LOC110492291 | LOC106566813 | coding | downstream | 36281 | 53617533 ~ 53633437 (-) |
| LOC110492292 | LOC106566814 | coding | downstream | 52622 | 53607410 ~ 53617096 (-) |
| LOC110491099 | LOC106572329 | coding | downstream | 229457 | 53438992 ~ 53440261 (-) |
| LOC110492286 | LOC106566818 | coding | downstream | 292726 | 53324324 ~ 53376992 (-) |
| LOC110492295 | LOC102779685 | coding | upstream | 6620 | 53678310 ~ 53681048 (-) |
| LOC110492296 | LOC106566808 | coding | upstream | 17482 | 53689172 ~ 53695764 (-) |
| LOC110491101 | LOC106566920 | coding | upstream | 40180 | 53711870 ~ 53727973 (-) |
| LOC110492299 | LOC106566805 | coding | upstream | 58474 | 53730164 ~ 53757019 (-) |
| LOC110492300 | LOC106566804 | coding | upstream | 86670 | 53758360 ~ 53776201 (-) |
| G1388516 | NA | non-coding | downstream | 43280 | 53562974 ~ 53626438 (-) |
| G1388480 | vps13d | non-coding | downstream | 69953 | 53598077 ~ 53599765 (-) |
| G1388521 | NA | non-coding | downstream | 100543 | 53566411 ~ 53569175 (-) |
| G1388482 | NA | non-coding | downstream | 149847 | 53519349 ~ 53519871 (-) |
| G1388481 | NA | non-coding | downstream | 150458 | 53518199 ~ 53519260 (-) |
| G1388578 | NA | non-coding | upstream | 12228 | 53683918 ~ 53684208 (-) |
| G1388583 | NA | non-coding | upstream | 31310 | 53703000 ~ 53703266 (-) |
| G1388597 | NA | non-coding | upstream | 48993 | 53720683 ~ 53721152 (-) |
| LOC110491103 | LOC106566803 | non-coding | upstream | 105185 | 53776875 ~ 53919347 (-) |
| G1388236 | NA | other | downstream | 636797 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1097411 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1240959 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1679723 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2554653 | 51113403 ~ 51117850 (-) |
| G1389763 | NA | other | upstream | 873038 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1313128 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2152469 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2392813 | 56064503 ~ 56064862 (-) |
