Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53703000 ~ 53703266 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585929 | True | 267 | lncRNA | 0.44 | 1 | 53703000 | 53703266 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492296 | LOC106566808 | coding | downstream | 7236 | 53689172 ~ 53695764 (-) |
| LOC110492295 | LOC102779685 | coding | downstream | 21952 | 53678310 ~ 53681048 (-) |
| LOC110492293 | LOC106566812 | coding | downstream | 36157 | 53639870 ~ 53666843 (-) |
| LOC110492291 | LOC106566813 | coding | downstream | 69563 | 53617533 ~ 53633437 (-) |
| LOC110492292 | LOC106566814 | coding | downstream | 85904 | 53607410 ~ 53617096 (-) |
| LOC110491101 | LOC106566920 | coding | upstream | 8604 | 53711870 ~ 53727973 (-) |
| LOC110492299 | LOC106566805 | coding | upstream | 26898 | 53730164 ~ 53757019 (-) |
| LOC110492300 | LOC106566804 | coding | upstream | 55094 | 53758360 ~ 53776201 (-) |
| LOC110491103 | LOC106566803 | coding | upstream | 73612 | 53776875 ~ 53919347 (-) |
| commd7 | comd7 | coding | upstream | 253645 | 53956911 ~ 53968135 (-) |
| G1388578 | NA | non-coding | downstream | 18792 | 53683918 ~ 53684208 (-) |
| G1388532 | LOC106566810 | non-coding | downstream | 31310 | 53669718 ~ 53671690 (-) |
| G1388516 | NA | non-coding | downstream | 76562 | 53562974 ~ 53626438 (-) |
| G1388480 | vps13d | non-coding | downstream | 103235 | 53598077 ~ 53599765 (-) |
| G1388521 | NA | non-coding | downstream | 133825 | 53566411 ~ 53569175 (-) |
| G1388597 | NA | non-coding | upstream | 17417 | 53720683 ~ 53721152 (-) |
| G1389286 | NA | non-coding | upstream | 91747 | 53795013 ~ 53795218 (-) |
| G1389288 | NA | non-coding | upstream | 93545 | 53796811 ~ 53797106 (-) |
| G1388236 | NA | other | downstream | 670079 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1130693 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1274241 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1713005 | 51978399 ~ 51990025 (-) |
| dffb | LOC106566885 | other | downstream | 2587935 | 51113403 ~ 51117850 (-) |
| G1389763 | NA | other | upstream | 841462 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1281552 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2120893 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2361237 | 56064503 ~ 56064862 (-) |
