Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388632 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53794569 ~ 53795039 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585992 | True | 471 | lncRNA | 0.46 | 1 | 53794569 | 53795039 |
53,792,800
53,793,200
53,793,600
53,794,000
53,794,400
53,794,800
53,795,200
53,795,200
53,795,600
53,796,000
53,796,400
53,796,800
53,797,200
53,797,600
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492298 | LOC106566929 | coding | upstream | 85296 | 53707976 ~ 53709273 (+) |
| LOC110492297 | LOC106566807 | coding | upstream | 89565 | 53703432 ~ 53705004 (+) |
| LOC110492294 | LOC106566810 | coding | upstream | 117624 | 53669626 ~ 53676945 (+) |
| vps13d | vps13d | coding | upstream | 194797 | 53532057 ~ 53599772 (+) |
| LOC110491100 | LOC106566816 | coding | upstream | 276396 | 53505570 ~ 53518173 (+) |
| dnmt3bb.1 | LOC106566802 | coding | downstream | 176912 | 53971951 ~ 54034345 (+) |
| LOC110492303 | LOC106566801 | coding | downstream | 250896 | 54045935 ~ 54061849 (+) |
| LOC110492304 | mapre1 | coding | downstream | 275294 | 54070333 ~ 54078004 (+) |
| LOC110491104 | LOC106566798 | coding | downstream | 283228 | 54078267 ~ 54098791 (+) |
| LOC110492305 | LOC106566799 | coding | downstream | 303903 | 54098942 ~ 54119178 (+) |
| G1388629 | NA | non-coding | upstream | 4883 | 53789418 ~ 53789686 (+) |
| G1388628 | LOC106566803 | non-coding | upstream | 5654 | 53787758 ~ 53788915 (+) |
| G1388627 | NA | non-coding | upstream | 7101 | 53786482 ~ 53787468 (+) |
| G1388626 | NA | non-coding | upstream | 7960 | 53785848 ~ 53786609 (+) |
| G1388625 | NA | non-coding | upstream | 10500 | 53783533 ~ 53784069 (+) |
| G1388635 | NA | non-coding | downstream | 5538 | 53800577 ~ 53800986 (+) |
| G1388637 | NA | non-coding | downstream | 10236 | 53805275 ~ 53805607 (+) |
| G1388649 | NA | non-coding | downstream | 28387 | 53823426 ~ 53823734 (+) |
| G1388652 | NA | non-coding | downstream | 31625 | 53826664 ~ 53826890 (+) |
| G1388654 | NA | non-coding | downstream | 34325 | 53829364 ~ 53829625 (+) |
| G1387575 | NA | other | upstream | 467978 | 53321781 ~ 53326591 (+) |
| G1387286 | NA | other | upstream | 1003280 | 52790938 ~ 52791289 (+) |
| G1386998 | NA | other | upstream | 1508112 | 52282193 ~ 52286457 (+) |
| LOC110492224 | NA | other | upstream | 1873797 | 51916126 ~ 51920772 (+) |
| G1386254 | LOC106566883 | other | upstream | 2233691 | 51560153 ~ 51560878 (+) |
| G1388806 | NA | other | downstream | 368047 | 54163086 ~ 54229861 (+) |
| G1388917 | LOC106566792 | other | downstream | 504135 | 54299174 ~ 54302158 (+) |
| G1388919 | LOC106566792 | other | downstream | 511411 | 54306450 ~ 54306908 (+) |
| LOC110492320 | LOC106566780 | other | downstream | 986661 | 54769016 ~ 54821566 (+) |
