Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389292 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53804465 ~ 53804668 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1586718 | True | 204 | lncRNA | 0.43 | 1 | 53804465 | 53804668 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492300 | LOC106566804 | coding | downstream | 28264 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 47446 | 53730164 ~ 53757019 (-) |
| LOC110491101 | LOC106566920 | coding | downstream | 76492 | 53711870 ~ 53727973 (-) |
| LOC110492296 | LOC106566808 | coding | downstream | 108701 | 53689172 ~ 53695764 (-) |
| LOC110492295 | LOC102779685 | coding | downstream | 123417 | 53678310 ~ 53681048 (-) |
| commd7 | comd7 | coding | upstream | 152243 | 53956911 ~ 53968135 (-) |
| LOC110491105 | LOC106566796 | coding | upstream | 362712 | 54163558 ~ 54236936 (-) |
| LOC110492306 | LOC106566792 | coding | upstream | 475677 | 54280345 ~ 54456016 (-) |
| LOC118936330 | NA | coding | upstream | 830717 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 834803 | 54639471 ~ 54640714 (-) |
| G1389291 | NA | non-coding | downstream | 1708 | 53802479 ~ 53802757 (-) |
| G1389290 | NA | non-coding | downstream | 3236 | 53800976 ~ 53801229 (-) |
| G1389289 | NA | non-coding | downstream | 4037 | 53800013 ~ 53800428 (-) |
| G1389288 | NA | non-coding | downstream | 7359 | 53796811 ~ 53797106 (-) |
| G1389286 | NA | non-coding | downstream | 9247 | 53795013 ~ 53795218 (-) |
| G1389312 | NA | non-coding | upstream | 17944 | 53822612 ~ 53822971 (-) |
| G1389313 | NA | non-coding | upstream | 19143 | 53823811 ~ 53824039 (-) |
| G1389315 | NA | non-coding | upstream | 20677 | 53825345 ~ 53825559 (-) |
| G1389316 | NA | non-coding | upstream | 21006 | 53825674 ~ 53825894 (-) |
| G1389331 | NA | non-coding | upstream | 40191 | 53844859 ~ 53845159 (-) |
| G1388236 | NA | other | downstream | 771544 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1232158 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1375706 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1814470 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 740060 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1180150 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 2019491 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2259835 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 2420746 | 56225414 ~ 56226061 (-) |
