XLOC_032904 (nme7)


Basic Information

Item Value
gene id XLOC_032904
gene name nme7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 29227489 ~ 29288155 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063937
ACAGTGAGAATCGAACTAAGCAAAATATTCAACCTCCAGTCGTCTGTTTACTGAGTAGACTTCACAAATAGAAGTTGTCTTAATGTTAAAAAGGCTACGCGTTAACTGGGAGTCCGTTTCATTGCTTTATTTGTCGGTAGCACGTTTGATGTTGTTGCTATGGTGATGGTGGCACATAACAGCGAGGATAAAGGAAGACGACCCACCTTCTCTTAAACAACAAACAACAGTCATTAACATTATCCATTTAATAACAAAATTCACACATGGAGGAGCGCTTTGCTTTTCTGGCTGAGTGGTACGACCCCAGTGCGGCTCTCCTGCGGCGATACCAGCTGCTCTACTACCCTAAAGATGGCTCGGTGGAGATGTTTGATATGAAGAACCAGCGGACCTTCCTGCGGAGGACCAAGTTGGAGGAGCTTCAACCAGAAGATCTGTTTGTTGGAAACCGAGTGAACATCTTTTCACGTCAGCTGAACCTCATAAGTTATGGGGATCAGTACACAGCCAACAAGCTGGGCAGTAAGAAGGAAAGGACTTTGGCTATGATTAAGCCGGATGCTGTCAGTAAAGTTGGCGACATTATTCAGATGATTTATGATGCCAACCTAATCGTCACCAAAGCCAAAATGACTAAACTTACATGGAAGCAGGCAGCGGACTTTTACATGGAACATCAATCAAAGTCTTTTTTCAATAATCTGGTGCAGTTTGTGAGCTCTGGCCCTGTAATTGCTATGGAGCTGATGGGGGACGAGGCGGTGTCGACTTGGAGAAAAGTTCTAGGCCCGACGGATTCTGGTGTGGCACAAAAAGAGGCAGCGCATAGTCTAAGAGGCCAGTTTGGTACAGACGGAACTAAGAATGCAGGACATGGTTCAGACTCATTGGCATCTGCTGCACGGGAATTGGAGTACTTTTTTCCCTCCACTGCTGGTCACGGCCTCTCAAACACAGCCAAATATTCAGACTGTACCTGCTGTATCATCAAACCTCATGCCATCTCAGAAGcattgacaGGAAAGATCCTTAAATCAATCATAGAAAATGGGTTCGAGATATCTGCCCTACAAATGTTCAACATGGATCGAGCAAATGCTGAGGAGTTTTTAGAGGTTTATAAAGGGGTTGTTGCCGAGTACACTAAAATGGTGGACGAACTTTGCTCTGGACCTTGCATGGCCCTGGAAATACATGCCACAGATGCACCAAGAACCTTTCGAGAGTTTTGCGGACCAGCAGATCCTGAAATTGCACGCCACCTTCGGCCCAAAACTTTACGAGCCCTGTACGGCAAAAACAAACTGCAGAACGGCGTTCACTGCACAGACCTACCAGAGGACGGGATTCTAGAGGTCCAGTATTTCTTTAAGATTTTAGATGGATGAAGCAACTGTGAGATGGAGATGTCTTTTCGGCTGTGATTTCAATAAAGACCACTTTGACAATGC
>TCONS_00063938
AACCTTTCCTCAAAGTAGCACACAGCTGTTCATTGACAAACAGTCCATGGTCATGAAGATGTTTAACTTTTTGCACAGGCAGCAGGCAGCGGACTTTTACATGGAACATCAATCAAAGTCTTTTTTCAATAATCTGGTGCAGTTTGTGAGCTCTGGCCCTGTAATTGCTATGGAGCTGATGGGGGACGAGGCGGTGTCGACTTGGAGAAAAGTTCTAGGCCCGACGGATTCTGGTGTGGCACAAAAAGAGGCAGCGCATAGTCTAAGAGGCCAGTTTGGTACAGACGGAACTAAGAATGCAGGACATGGTTCAGACTCATTGGCATCTGCTGCACGGGAATTGGAGTACTTTTTTCCCTCCACTGCTGGTCACGGCCTCTCAAACACAGCCAAATATTCAGACTGTACCTGCTGTATCATCAAACCTCATGCCATCTCAGAAGcattgacaGGAAAGATCCTTAAATCAATCATAGAAAAT

Function

symbol description
nme7 Predicted to enable ATP binding activity; metal ion binding activity; and nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in centrosome. Is expressed in several structures, including digestive system; eye; female organism; gonad; and male organism. Orthologous to human NME7 (NME/NM23 family member 7).

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005813 centrosome cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000210-35 Predicted to enable ATP binding activity; metal ion binding activity; and nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in centrosome. Is expressed in several structures, including digestive system; eye; female organism; gonad; and male organism. Orthologous to human NME7 (NME/NM23 family member 7).

Ensembl:

ensembl_id ENSDARG00000056193

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063937 False 1454 mRNA 0.45 12 29227489 29288155
TCONS_00063938 True 481 processed_transcript 0.46 5 29258238 29274408

Neighbor

gene id symbol gene type direction distance location
XLOC_032903 dpt coding downstream 31847 29184137 ~ 29195642 (-)
XLOC_032902 zbtb11 coding downstream 67601 29144776 ~ 29159888 (-)
XLOC_032901 dipk1ab coding downstream 84026 29102942 ~ 29143463 (-)
XLOC_032900 evi5b coding downstream 141016 29011911 ~ 29086473 (-)
XLOC_032899 gfi1ab coding downstream 219996 29004062 ~ 29007493 (-)
XLOC_032905 bivm coding upstream 7155 29295310 ~ 29305132 (-)
XLOC_032906 tmem131 coding upstream 25065 29313220 ~ 29377092 (-)
XLOC_032907 mrpl47 coding upstream 109399 29397554 ~ 29402578 (-)
XLOC_032908 NA coding upstream 122071 29410226 ~ 29411285 (-)
XLOC_032909 pex5la coding upstream 188778 29476933 ~ 29612269 (-)
XLOC_032898 NA non-coding downstream 241092 28984017 ~ 28986397 (-)
XLOC_032892 NA non-coding downstream 1097359 28124381 ~ 28130130 (-)
XLOC_032890 NA non-coding downstream 1272888 27938489 ~ 27954601 (-)
XLOC_032887 NA non-coding downstream 1603968 27620675 ~ 27623521 (-)
XLOC_032886 NA non-coding downstream 1735742 27490737 ~ 27491747 (-)
XLOC_032910 NA non-coding upstream 369746 29657901 ~ 29659956 (-)
XLOC_032911 NA non-coding upstream 462805 29750960 ~ 29752357 (-)
XLOC_032912 NA non-coding upstream 483212 29771367 ~ 29790125 (-)
XLOC_032913 NA non-coding upstream 538299 29826454 ~ 29831187 (-)

Expression


Co-expression Network