Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389331 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 53844859 ~ 53845159 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1586757 | True | 301 | lncRNA | 0.52 | 1 | 53844859 | 53845159 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492300 | LOC106566804 | coding | downstream | 68658 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 87840 | 53730164 ~ 53757019 (-) |
| LOC110491101 | LOC106566920 | coding | downstream | 116886 | 53711870 ~ 53727973 (-) |
| LOC110492296 | LOC106566808 | coding | downstream | 149095 | 53689172 ~ 53695764 (-) |
| LOC110492295 | LOC102779685 | coding | downstream | 163811 | 53678310 ~ 53681048 (-) |
| commd7 | comd7 | coding | upstream | 111752 | 53956911 ~ 53968135 (-) |
| LOC110491105 | LOC106566796 | coding | upstream | 322221 | 54163558 ~ 54236936 (-) |
| LOC110492306 | LOC106566792 | coding | upstream | 435186 | 54280345 ~ 54456016 (-) |
| LOC118936330 | NA | coding | upstream | 790226 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 794312 | 54639471 ~ 54640714 (-) |
| G1389316 | NA | non-coding | downstream | 18965 | 53825674 ~ 53825894 (-) |
| G1389315 | NA | non-coding | downstream | 19300 | 53825345 ~ 53825559 (-) |
| G1389313 | NA | non-coding | downstream | 20820 | 53823811 ~ 53824039 (-) |
| G1389312 | NA | non-coding | downstream | 21888 | 53822612 ~ 53822971 (-) |
| G1389292 | NA | non-coding | downstream | 40191 | 53804465 ~ 53804668 (-) |
| G1389332 | NA | non-coding | upstream | 712 | 53845871 ~ 53846118 (-) |
| G1389477 | NA | non-coding | upstream | 192235 | 54037394 ~ 54037660 (-) |
| G1389479 | NA | non-coding | upstream | 194091 | 54039250 ~ 54039467 (-) |
| G1389489 | LOC106566801 | non-coding | upstream | 211078 | 54056237 ~ 54058839 (-) |
| G1389490 | NA | non-coding | upstream | 213760 | 54058919 ~ 54059264 (-) |
| G1388236 | NA | other | downstream | 811938 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1272552 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1416100 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 1854864 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 699569 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 1139659 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1979000 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2219344 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 2380255 | 56225414 ~ 56226061 (-) |
