Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389489 |
| gene name | LOC106566801 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54056237 ~ 54058839 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1586922 | True | 1332 | lncRNA | 0.47 | 6 | 54056237 | 54058839 |
54,053,000
54,054,000
54,055,000
54,056,000
54,057,000
54,058,000
54,059,000
54,060,000
54,061,000
54,062,000
NC_048580.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| commd7 | comd7 | coding | downstream | 88102 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 136890 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 280036 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 299218 | 53730164 ~ 53757019 (-) |
| LOC110491101 | LOC106566920 | coding | downstream | 328264 | 53711870 ~ 53727973 (-) |
| LOC110491105 | LOC106566796 | coding | upstream | 108541 | 54163558 ~ 54236936 (-) |
| LOC110492306 | LOC106566792 | coding | upstream | 221506 | 54280345 ~ 54456016 (-) |
| LOC118936330 | NA | coding | upstream | 576546 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 580632 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 897023 | 54946478 ~ 54957989 (-) |
| G1389479 | NA | non-coding | downstream | 16770 | 54039250 ~ 54039467 (-) |
| G1389477 | NA | non-coding | downstream | 18577 | 54037394 ~ 54037660 (-) |
| G1389332 | NA | non-coding | downstream | 210119 | 53845871 ~ 53846118 (-) |
| G1389331 | NA | non-coding | downstream | 211078 | 53844859 ~ 53845159 (-) |
| G1389316 | NA | non-coding | downstream | 230343 | 53825674 ~ 53825894 (-) |
| G1389490 | NA | non-coding | upstream | 80 | 54058919 ~ 54059264 (-) |
| G1389491 | NA | non-coding | upstream | 1399 | 54060238 ~ 54060683 (-) |
| G1389492 | NA | non-coding | upstream | 1957 | 54060796 ~ 54061250 (-) |
| G1389496 | NA | non-coding | upstream | 9269 | 54068108 ~ 54068314 (-) |
| G1389471 | mapre1 | non-coding | upstream | 14860 | 54073699 ~ 54077975 (-) |
| G1388236 | NA | other | downstream | 1023316 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1483930 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1627478 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2066242 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 485889 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 925979 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1765320 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 2005664 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 2166575 | 56225414 ~ 56226061 (-) |
