G1389471 (mapre1)


Basic Information

Item Value
gene id G1389471
gene name mapre1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54073699 ~ 54077975 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1586902
TTGTTTGTAAGAAACTTGAGTCGGCTAACATGATTTAAGTAAatcagaaaaaaataaaatacatttcccgctgaaatatataaatgtaaacaaaaatcacaaaataaataaaatcaccaaaaaaaaacagagacaaacaaaaaaaaagagagCAGAAGGTGGCACAAGGCCCACAGTGTACCAGAATGTCAACACAGATGTCACAGGGGAGATCTGATGCAACACCACTGATCTTTCACACCCCAAAAACACAAGAGCTGCAAGGGCTCCTTCCAATAACCACACCAATCATTCAGAAGATCTAGAAAATAATACAATCAGGGACCAATAGCTAACAGGGTTAAAGGTCAAGATTGGCACcaggttagattgaaacaggccATTGCGGGGTTCTGCCTTGTATATAAAATGCACTTCACCAAAACAATTTCCACCTTCCAGACTGACTACATTATAGATGTCTGCCAAATCTCAACTCCTGGATAAGTGTTTAATATCTGCAAACCACATATATAGCAAACTGATAGACTGTGCAGTCGATGACGTTGGTTGTAGACTGCTGGAACATGACCCGTGTTTAAGACCCAAATAGCCACAAAAATCTGCCACCAGGATAGTTTAGTCATCAAACAAGCCAAGTTCAAAAAAGACAATTATGTTTTTAAACGATCACTCAAAACAACATTTCTTGACTTAAGGTTAACAGTCATAATGATTATTTCTGTGTTTTAAAACATACACATTCATATCCCAATACATTTTGAAACACTGTTTTGGACATGGTATTCCCAAAAAGTAGACAAATTAAATTAGGGTTGTGGTCCTGAAGAACGTAACGAGGACCAAAACGtaattgaaaaaaataaatattacagCCAGGCATCACCATGCAAAAACTTTCCGAAATGCACGACATTCAAACTTCCTTCATTACCTAAAAAAGTCCCGTTTTAGTGCCAGAAAACTAAAGTACACTACAATGGTCAAATCTATGTGCAGCTCCCACGTGGGCTTCAAGCCAATTCATTACATATTCAGCATCAGAAAATCCCCTTCATAAAAAACTACATGCAAAGCTGATGCCCAGCCATCAGCACAACCAAAGGATGCTATAGATCACATTGTGGCATTACTGTTCAATTTATTATACATTATTTAACAGGCCTTGTAAGGAGGCAAGACTTTGGACTTGTCAGTTATGTACTTCTAATTAATCAGATAGGTCATTTCAGCCAACAGATGGGTGGCACGAGTTAGATTAAGTACACCAATAAGTTCAGAACACTTCAAATGAACCATCAATGATGTCCACATGGAAATTGGCCTGTCAGAGCATTGTATTAACTGGAAGACTGAACATCTATTTGCCAGATTCTCTAGACGTCCATTCAGAGCAGCAGAAAGAAGAAAACAAGATCTGAAATGACAATTCTTTAAATTGAATTACAAACATTTGCCAAAAAGAGAGTACAAAGTCACATATGTAGGTTATGAAAGGTATATAAGAATAAGGCAAAGGTATTTATTATGATTTATTCTTAAATACCTTCCATAACCTACATATGTGACTTTGTACTCTTTTTGGCAAATGTTTGTAATtcataaaacttttttttttttttaatctctgATCTTCCAGTGCAGAGACTGGCAGTTGTATTTGTGCATCAGCATTTTGGGCCTAGAACCTGTCAATGGTGCAGTGGCTACATAATCAAAACAGATTAAAACGCAAGACaggagtttaaaaaaataaatgaacttAAGAAAATGAACACTAGAGGTGCTAAATCAAGTTAAAACTCCATACCCTGCCAACTGAACAATTTTAGACAAGAGAAattacaaaaaacaaaacaaagtggGTAATTTGGGATGTGCTTGGGACCAGAGAGTTTCTGGCATCCACAGTGCACATGCCTTCCAACATCCAAGAGACAAACACGCACAAAATATTCCACCATAAGCTTGTAGTTTAACATGTTTCTTCATAAATATCGTCAGGTTGTTATGAGCTGTCCCGAGAATTGCAGCCACACTAAGAGACGTTGACCTGAATCTTTGAGAAAAAAGTGCCACTTTCCTAGAATAAAAAGGATTGCACCGTTTAATAAAAATTGTAATCTCCAAACAGGAGGAGACCAAATGAAAGTAGACAACTCAACTAGGTTTGAGAGATATGAACAGTTGGTTACTAAAGCAGATAAAAATGTCCCACGATCACTACATTAACAAAGTGAATTTGCTCAGACCCAGAAAACAAAGACAGTGATAATTTAGAAAACAGATAAAACCAGAAAAATActatgtacaaaagtgagtgcaGGTTCCAATGACCTTGTAACGCCAATTCCTGGAACAGACACAGAAATTGAGGGGAAAGACAAGCAAACAAAAAAATCTTAGACAGTTCACTCTTCTGGACCCCAATGGCTGCCTTCTAACAACATGATGCTGATACGGGCCAATGGGATGACCCAGAGAAGGGCTTTCAAAAGAGgtacttcacacacacacttacttattTCAACTTGATTTTacagaaaacaaacatttgatATACAGTCCACTCGGAGATCACGAACGCATAACATGATACATTTTTTGGAGTGGGTGTTGTACgtagggagaggatagagatgttGTAGCTGATTGAAGGAGTTTGGTGGGTTGAGGGGTTGTATTAAAAGCTGCATGATCCAGTCTTGAACGTTAGAATTCCTCCTGGTCCTCTGACTCAGCGTCCGGTATGACAAAGCCCTCCTGAGAtcaATCTGTGGCGTAGAGTATATCCACGATCCTCTGCAGTGTGGGATCACCCTCTCCTTCCTTTTCTTGGCAGATGAGCTCAATGTTCCTCAGTTTGCCGAAATAAaagtccctctccttctccatgtcCTGGATGGTGGACTTTAGTATATTTAC

Function

symbol description
mapre1 Enables identical protein binding activity; microtubule plus-end binding activity; and protein kinase binding activity. Involved in cell migration; protein localization to microtubule; and regulation of microtubule polymerization. Located in focal adhesion and microtubule cytoskeleton. Colocalizes with spindle.

NR:

description
PREDICTED: microtubule-associated protein RP/EB family member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1586902 True 2925 lncRNA 0.38 2 54073699 54077975

Neighbor

gene id symbol gene type direction distance location
commd7 comd7 coding downstream 105564 53956911 ~ 53968135 (-)
LOC110491103 LOC106566803 coding downstream 154352 53776875 ~ 53919347 (-)
LOC110492300 LOC106566804 coding downstream 297498 53758360 ~ 53776201 (-)
LOC110492299 LOC106566805 coding downstream 316680 53730164 ~ 53757019 (-)
LOC110491101 LOC106566920 coding downstream 345726 53711870 ~ 53727973 (-)
LOC110491105 LOC106566796 coding upstream 89405 54163558 ~ 54236936 (-)
LOC110492306 LOC106566792 coding upstream 202370 54280345 ~ 54456016 (-)
LOC118936330 NA coding upstream 557410 54635385 ~ 54635876 (-)
LOC110491107 NA coding upstream 561496 54639471 ~ 54640714 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 877887 54946478 ~ 54957989 (-)
G1389496 NA non-coding downstream 5385 54068108 ~ 54068314 (-)
G1389492 NA non-coding downstream 12449 54060796 ~ 54061250 (-)
G1389491 NA non-coding downstream 13016 54060238 ~ 54060683 (-)
G1389490 NA non-coding downstream 14435 54058919 ~ 54059264 (-)
G1389489 LOC106566801 non-coding downstream 14860 54056237 ~ 54058839 (-)
G1389506 NA non-coding upstream 9077 54087052 ~ 54087269 (-)
G1389509 NA non-coding upstream 12607 54090582 ~ 54090817 (-)
G1389512 NA non-coding upstream 17705 54095680 ~ 54095947 (-)
G1389472 acss2 non-coding upstream 34699 54112674 ~ 54114811 (-)
G1389474 NA non-coding upstream 38488 54116463 ~ 54140078 (-)
G1388236 NA other downstream 1040778 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 1501392 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 1644940 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 2083704 51978399 ~ 51990025 (-)
G1389763 NA other upstream 466753 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 906843 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1746184 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1986528 56064503 ~ 56064862 (-)
G1391624 NA other upstream 2147439 56225414 ~ 56226061 (-)

Expression


Co-expression Network