G1389512



Basic Information


Item Value
gene id G1389512
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54095680 ~ 54095947 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1586948
CCGCTGGGAGGTcattgaatttgtggaatttaccCCAACCCTAATAGTCTCATGCGGAGGAACAAGGAGATGGTCATGGTAAAAATGGGAAGCACCCACCTGCTCTCGGCTGCTAAAGGACACCTGGAGGTCCGGGGGACAGGAGGGCAGGTGGTGCCTCACTTTCTGCTTGTAGGCAAGCCCCAGGATGGCACTCGTCTGCAGGGGAAATACAACAAGTAATGCTCTCTCACACCTAAACCCAACCACACTTTACAGTGCTATATAA

Function


NR:

description
PREDICTED: WD repeat-containing protein on Y chromosome-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1586948 True 268 lncRNA 0.52 1 54095680 54095947

Neighbor


gene id symbol gene type direction distance location
commd7 comd7 coding downstream 127545 53956911 ~ 53968135 (-)
LOC110491103 LOC106566803 coding downstream 176333 53776875 ~ 53919347 (-)
LOC110492300 LOC106566804 coding downstream 319479 53758360 ~ 53776201 (-)
LOC110492299 LOC106566805 coding downstream 338661 53730164 ~ 53757019 (-)
LOC110491101 LOC106566920 coding downstream 367707 53711870 ~ 53727973 (-)
LOC110491105 LOC106566796 coding upstream 71433 54163558 ~ 54236936 (-)
LOC110492306 LOC106566792 coding upstream 184398 54280345 ~ 54456016 (-)
LOC118936330 NA coding upstream 539438 54635385 ~ 54635876 (-)
LOC110491107 NA coding upstream 543524 54639471 ~ 54640714 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 859915 54946478 ~ 54957989 (-)
G1389509 NA non-coding downstream 4863 54090582 ~ 54090817 (-)
G1389506 NA non-coding downstream 8411 54087052 ~ 54087269 (-)
G1389471 mapre1 non-coding downstream 17705 54073699 ~ 54077975 (-)
G1389496 NA non-coding downstream 27366 54068108 ~ 54068314 (-)
G1389492 NA non-coding downstream 34430 54060796 ~ 54061250 (-)
G1389472 acss2 non-coding upstream 16727 54112674 ~ 54114811 (-)
G1389474 NA non-coding upstream 20516 54116463 ~ 54140078 (-)
G1389533 NA non-coding upstream 45269 54141216 ~ 54141627 (-)
G1389537 NA non-coding upstream 48860 54144807 ~ 54145085 (-)
G1388236 NA other downstream 1062759 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 1523373 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 1666921 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 2105685 51978399 ~ 51990025 (-)
G1389763 NA other upstream 448781 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 888871 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1728212 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1968556 56064503 ~ 56064862 (-)
G1391624 NA other upstream 2129467 56225414 ~ 56226061 (-)

Expression



Co-expression Network