G1389582


Basic Information

Item Value
gene id G1389582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54231486 ~ 54232349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1587025
ctcctccatccttcctctctcttccatccttcccccctcctctctcctccaccccccatcctctctccgcCATccttcccccatcctctctcctccatccttcccccatcctctctcctccatccttcccccatcctctctcctccatccttccccatcctctctcctccatccttccccatcctctctcctccatccttcccccatcctctctcctccatccttcccccatcctctctcctccatccttccccatcctctctcctccatccttcccccatcctctctcctccatccttccccgatcctctctactccatccttcccccatcctctctactccatccttcccccatcctctctactccatccttccccatcctctctactccatcctctctcctccatccttcctccatcctctctcctccatccttcctccatcctctctcCTCCATccttcccccatcctctctcctccatccttccccatcctctctactccatccttccccatcctctctactccatccttcccccatcctctctactccatccttcccccatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1587025 True 568 lncRNA 0.58 2 54231486 54232349

Neighbor

gene id symbol gene type direction distance location
commd7 comd7 coding downstream 263351 53956911 ~ 53968135 (-)
LOC110491103 LOC106566803 coding downstream 312139 53776875 ~ 53919347 (-)
LOC110492300 LOC106566804 coding downstream 455285 53758360 ~ 53776201 (-)
LOC110492299 LOC106566805 coding downstream 474467 53730164 ~ 53757019 (-)
LOC110491101 LOC106566920 coding downstream 503513 53711870 ~ 53727973 (-)
LOC110492306 LOC106566792 coding upstream 47996 54280345 ~ 54456016 (-)
LOC118936330 NA coding upstream 403036 54635385 ~ 54635876 (-)
LOC110491107 NA coding upstream 407122 54639471 ~ 54640714 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 723513 54946478 ~ 54957989 (-)
sema3b LOC106566773 coding upstream 934414 55166763 ~ 55255352 (-)
LOC110491105 LOC106566796 non-coding downstream 62514 54163558 ~ 54236936 (-)
G1389537 NA non-coding downstream 86401 54144807 ~ 54145085 (-)
G1389533 NA non-coding downstream 89859 54141216 ~ 54141627 (-)
G1389474 NA non-coding downstream 91408 54116463 ~ 54140078 (-)
G1389472 acss2 non-coding downstream 116675 54112674 ~ 54114811 (-)
G1389598 NA non-coding upstream 31255 54263604 ~ 54264208 (-)
G1389621 NA non-coding upstream 81735 54314084 ~ 54314284 (-)
G1389626 NA non-coding upstream 98741 54331090 ~ 54331302 (-)
G1389634 NA non-coding upstream 111796 54344145 ~ 54344470 (-)
G1388236 NA other downstream 1198565 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 1659179 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 1802727 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 2241491 51978399 ~ 51990025 (-)
G1389763 NA other upstream 312379 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 752469 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1591810 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1832154 56064503 ~ 56064862 (-)
G1391624 NA other upstream 1993065 56225414 ~ 56226061 (-)

Expression


Co-expression Network