Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54263604 ~ 54264208 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: oxysterol-binding protein-related protein 2-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587047 | True | 405 | lncRNA | 0.54 | 2 | 54263604 | 54264208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491105 | LOC106566796 | coding | downstream | 26668 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 295469 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 344257 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 487403 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 506585 | 53730164 ~ 53757019 (-) |
| LOC110492306 | LOC106566792 | coding | upstream | 16137 | 54280345 ~ 54456016 (-) |
| LOC118936330 | NA | coding | upstream | 371177 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 375263 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 691654 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 902555 | 55166763 ~ 55255352 (-) |
| G1389582 | NA | non-coding | downstream | 31255 | 54231486 ~ 54232349 (-) |
| G1389537 | NA | non-coding | downstream | 118519 | 54144807 ~ 54145085 (-) |
| G1389533 | NA | non-coding | downstream | 121977 | 54141216 ~ 54141627 (-) |
| G1389474 | NA | non-coding | downstream | 123526 | 54116463 ~ 54140078 (-) |
| G1389621 | NA | non-coding | upstream | 49876 | 54314084 ~ 54314284 (-) |
| G1389626 | NA | non-coding | upstream | 66882 | 54331090 ~ 54331302 (-) |
| G1389634 | NA | non-coding | upstream | 79937 | 54344145 ~ 54344470 (-) |
| G1389636 | NA | non-coding | upstream | 81283 | 54345491 ~ 54345692 (-) |
| G1388236 | NA | other | downstream | 1230683 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1691297 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1834845 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2273609 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 280520 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 720610 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1559951 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1800295 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1961206 | 56225414 ~ 56226061 (-) |
