Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389626 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54331090 ~ 54331302 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587081 | True | 213 | lncRNA | 0.74 | 1 | 54331090 | 54331302 |
54,328,000
54,328,400
54,328,800
54,329,200
54,329,600
54,330,000
54,330,400
54,330,800
54,331,200
54,331,600
54,332,000
54,332,400
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491105 | LOC106566796 | coding | downstream | 94154 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 362955 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 411743 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 554889 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 574071 | 53730164 ~ 53757019 (-) |
| LOC118936330 | NA | coding | upstream | 304083 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 308169 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 624560 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 835461 | 55166763 ~ 55255352 (-) |
| actr8 | actr8 | coding | upstream | 1018842 | 55350144 ~ 55372295 (-) |
| G1389621 | NA | non-coding | downstream | 16806 | 54314084 ~ 54314284 (-) |
| LOC110492306 | LOC106566792 | non-coding | downstream | 37593 | 54280345 ~ 54456016 (-) |
| G1389598 | NA | non-coding | downstream | 66882 | 54263604 ~ 54264208 (-) |
| G1389582 | NA | non-coding | downstream | 98741 | 54231486 ~ 54232349 (-) |
| G1389634 | NA | non-coding | upstream | 12843 | 54344145 ~ 54344470 (-) |
| G1389636 | NA | non-coding | upstream | 14189 | 54345491 ~ 54345692 (-) |
| G1389641 | NA | non-coding | upstream | 18075 | 54349377 ~ 54349614 (-) |
| G1389650 | NA | non-coding | upstream | 36642 | 54367944 ~ 54368155 (-) |
| G1389656 | NA | non-coding | upstream | 43539 | 54374841 ~ 54375072 (-) |
| G1388236 | NA | other | downstream | 1298169 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1758783 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1902331 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2341095 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 213426 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 653516 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1492857 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1733201 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1894112 | 56225414 ~ 56226061 (-) |
