XLOC_032908


Basic Information

Item Value
gene id XLOC_032908
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 29410226 ~ 29411285 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065165
CTTCACATTCCTGCTGCTCGCACCACTGTGAGCCTCAGCCTCGGCGGAGCAGCGTGTCAGGCTGAAGAGGAGATCGGGCTATTTTTAAATCACACAGACCCGACATTCCTCATGGACCGACACTGGGATGTGACGACGAAAACATTGAGACATGCAAAGATGAAGGTGGGTGGAGGGGGGTGTGCAGGAGTGGGAAAACAATGGGTGTCCCCTTCGAGAAATATTCGGTATTTGACATTATTCACCCTGACGCCAAACGGTGGCGTTTTCAGAACTGCACACACTGCGTTTGATGCGTTTATTTTAGAAATCAAAATAGCGCCACATGCGTCAAGCTGTAGTGCTGTTtaattgcttgttttgttttgttgtttgtttgtttttgatgtaatttattttttatagttttccATGAAAGAAATTAATTGTATGATCAATTTTACAGTTTGTGTCAACGATATTTAGTTATCAACCTATGCTATGGTATAACCTACATATGGGTGATTATAAAAGAGAGGGTAGCCTACATTTTGCGTCTCCAAGTTAAACCTACtttttccaaaacaaaaaaaatatatgaagagttGCATGACACATCAATTTTTCGTATTTATCATTTTGCATAATTTCAAATCAATAATTGATTGAGTGTattgtaaattatacatttgCTGTCAAATTTCCAGTTTaaggaaaatttatgaataatgcttaaaaaaaacccACAATTCTGTAATGAGTGACATATTATGTAAAACACATGTTGAAATTGATGTTTTAGACAACAAGTGTTAGCCGTTTTATTTTCTTCACTGATTGGAAGAGTTTATGAACCAAACAAAATTATTCCAATGAATGAGCACATTACTATAATAATGGGTATTATGGAAGGTGGCTTCTGATTCTAGTGGGACCTgactgcaaaagaaaaaaaaaaaaagagagagagaaaataatcCCAAAATGTTTAGTggctatttgtttatttgcaatcATGTgaatgctttaattttttttttactccaattttgaacatttgtattaaaacaaatattttagt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065165 True 1060 lncRNA 0.35 1 29410226 29411285

Neighbor

gene id symbol gene type direction distance location
XLOC_032907 mrpl47 coding downstream 7648 29397554 ~ 29402578 (-)
XLOC_032906 tmem131 coding downstream 33134 29313220 ~ 29377092 (-)
XLOC_032905 bivm coding downstream 105094 29295310 ~ 29305132 (-)
XLOC_032904 nme7 coding downstream 122071 29227489 ~ 29288155 (-)
XLOC_032903 dpt coding downstream 214584 29184137 ~ 29195642 (-)
XLOC_032909 pex5la coding upstream 65648 29476933 ~ 29612269 (-)
XLOC_032910 NA coding upstream 246616 29657901 ~ 29659956 (-)
XLOC_032911 NA coding upstream 339675 29750960 ~ 29752357 (-)
XLOC_032912 NA coding upstream 360082 29771367 ~ 29790125 (-)
XLOC_032913 NA coding upstream 415169 29826454 ~ 29831187 (-)
XLOC_032898 NA non-coding downstream 423829 28984017 ~ 28986397 (-)
XLOC_032892 NA non-coding downstream 1280096 28124381 ~ 28130130 (-)
XLOC_032890 NA non-coding downstream 1455625 27938489 ~ 27954601 (-)
XLOC_032887 NA non-coding downstream 1786705 27620675 ~ 27623521 (-)
XLOC_032886 NA non-coding downstream 1918479 27490737 ~ 27491747 (-)
XLOC_032914 NA non-coding upstream 435208 29846493 ~ 29848847 (-)

Expression


Co-expression Network