Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54374841 ~ 54375072 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587111 | True | 232 | lncRNA | 0.32 | 1 | 54374841 | 54375072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491105 | LOC106566796 | coding | downstream | 137905 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 406706 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 455494 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 598640 | 53758360 ~ 53776201 (-) |
| LOC110492299 | LOC106566805 | coding | downstream | 617822 | 53730164 ~ 53757019 (-) |
| LOC118936330 | NA | coding | upstream | 260313 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 264399 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 580790 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 791691 | 55166763 ~ 55255352 (-) |
| actr8 | actr8 | coding | upstream | 975072 | 55350144 ~ 55372295 (-) |
| G1389650 | NA | non-coding | downstream | 6686 | 54367944 ~ 54368155 (-) |
| G1389641 | NA | non-coding | downstream | 25227 | 54349377 ~ 54349614 (-) |
| G1389636 | NA | non-coding | downstream | 29149 | 54345491 ~ 54345692 (-) |
| G1389634 | NA | non-coding | downstream | 30371 | 54344145 ~ 54344470 (-) |
| G1389626 | NA | non-coding | downstream | 43539 | 54331090 ~ 54331302 (-) |
| G1389707 | NA | non-coding | upstream | 82149 | 54457221 ~ 54462767 (-) |
| G1389753 | LOC106566793 | non-coding | upstream | 155552 | 54530624 ~ 54530955 (-) |
| G1389754 | NA | non-coding | upstream | 156145 | 54531217 ~ 54531427 (-) |
| G1389764 | NA | non-coding | upstream | 171773 | 54546845 ~ 54547138 (-) |
| G1389765 | LOC106566793 | non-coding | upstream | 174403 | 54549475 ~ 54549838 (-) |
| G1388236 | NA | other | downstream | 1341920 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1802534 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 1946082 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2384846 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 169656 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 609746 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1449087 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1689431 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1850342 | 56225414 ~ 56226061 (-) |
