G1389707


Basic Information

Item Value
gene id G1389707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54457221 ~ 54462767 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1587175
cttcattatttctcttcatatgacaaggattaaacaggatttgccagtagattgtcgacttgattcatgatgatgactgctagctaagattttgaaagtatgatgttgacatgatccgtccaatcaaagctactgtagatataacgtgatttgacgtaattttatctgtggccaacgACCTTAAgctttcttggatgggcacttctaatataactctatggcagcatccAAGGGGATAGATTTTTTTTtgctctacccttagatttggcggtgacgtagtgtccccatgagtgacagaccACTGAGCCAGtcatggcgcaactagagaacattaccaacccctatgctCCCTATTTTCCCTGGCTGCCCCACCATCACAAAAAGcattgagctaggctgaaacaccttgattatggagctgccttactcaaaaaaatgtttgtatgcggctttattaagtACAATTAGCTTTATTTAAAATTGTTTGCAAattgatatgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1587175 True 502 lncRNA 0.40 2 54457221 54462767

Neighbor

gene id symbol gene type direction distance location
LOC110492306 LOC106566792 coding downstream 1205 54280345 ~ 54456016 (-)
LOC110491105 LOC106566796 coding downstream 220285 54163558 ~ 54236936 (-)
commd7 comd7 coding downstream 489086 53956911 ~ 53968135 (-)
LOC110491103 LOC106566803 coding downstream 537874 53776875 ~ 53919347 (-)
LOC110492300 LOC106566804 coding downstream 681020 53758360 ~ 53776201 (-)
LOC118936330 NA coding upstream 172618 54635385 ~ 54635876 (-)
LOC110491107 NA coding upstream 176704 54639471 ~ 54640714 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 493095 54946478 ~ 54957989 (-)
sema3b LOC106566773 coding upstream 703996 55166763 ~ 55255352 (-)
actr8 actr8 coding upstream 887377 55350144 ~ 55372295 (-)
G1389656 NA non-coding downstream 82149 54374841 ~ 54375072 (-)
G1389650 NA non-coding downstream 89066 54367944 ~ 54368155 (-)
G1389641 NA non-coding downstream 107607 54349377 ~ 54349614 (-)
G1389636 NA non-coding downstream 111529 54345491 ~ 54345692 (-)
G1389634 NA non-coding downstream 112751 54344145 ~ 54344470 (-)
G1389753 LOC106566793 non-coding upstream 67857 54530624 ~ 54530955 (-)
G1389754 NA non-coding upstream 68450 54531217 ~ 54531427 (-)
G1389764 NA non-coding upstream 84078 54546845 ~ 54547138 (-)
G1389765 LOC106566793 non-coding upstream 86708 54549475 ~ 54549838 (-)
G1389769 NA non-coding upstream 89353 54552120 ~ 54556071 (-)
LOC110492299 LOC106566805 other downstream 724306 53730164 ~ 53757019 (-)
G1388236 NA other downstream 1424300 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 1884914 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 2028462 52379551 ~ 52428869 (-)
LOC110492226 LOC106572002 other downstream 2467226 51978399 ~ 51990025 (-)
G1389763 NA other upstream 81961 54544728 ~ 54545243 (-)
G1390030 ifrd2 other upstream 522051 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1361392 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1601736 56064503 ~ 56064862 (-)
G1391624 NA other upstream 1762647 56225414 ~ 56226061 (-)

Expression


Co-expression Network