Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389753 |
| gene name | LOC106566793 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54530624 ~ 54530955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| helicase ARIP4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587221 | True | 332 | lncRNA | 0.55 | 1 | 54530624 | 54530955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492306 | LOC106566792 | coding | downstream | 74608 | 54280345 ~ 54456016 (-) |
| LOC110491105 | LOC106566796 | coding | downstream | 293688 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 562489 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 611277 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 754423 | 53758360 ~ 53776201 (-) |
| LOC118936330 | NA | coding | upstream | 104430 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 108516 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 424907 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 635808 | 55166763 ~ 55255352 (-) |
| actr8 | actr8 | coding | upstream | 819189 | 55350144 ~ 55372295 (-) |
| G1389707 | NA | non-coding | downstream | 67857 | 54457221 ~ 54462767 (-) |
| G1389656 | NA | non-coding | downstream | 155552 | 54374841 ~ 54375072 (-) |
| G1389650 | NA | non-coding | downstream | 162469 | 54367944 ~ 54368155 (-) |
| G1389641 | NA | non-coding | downstream | 181010 | 54349377 ~ 54349614 (-) |
| G1389636 | NA | non-coding | downstream | 184932 | 54345491 ~ 54345692 (-) |
| G1389754 | NA | non-coding | upstream | 262 | 54531217 ~ 54531427 (-) |
| G1389764 | NA | non-coding | upstream | 15890 | 54546845 ~ 54547138 (-) |
| G1389765 | LOC106566793 | non-coding | upstream | 18520 | 54549475 ~ 54549838 (-) |
| G1389769 | NA | non-coding | upstream | 21165 | 54552120 ~ 54556071 (-) |
| G1389766 | LOC106566794 | non-coding | upstream | 30547 | 54561502 ~ 54566568 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 797709 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 1497703 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1958317 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 2101865 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2540629 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 13773 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 453863 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1293204 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1533548 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1694459 | 56225414 ~ 56226061 (-) |
