Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389754 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54531217 ~ 54531427 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587222 | True | 211 | lncRNA | 0.37 | 1 | 54531217 | 54531427 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492306 | LOC106566792 | coding | downstream | 75201 | 54280345 ~ 54456016 (-) |
| LOC110491105 | LOC106566796 | coding | downstream | 294281 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 563082 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 611870 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 755016 | 53758360 ~ 53776201 (-) |
| LOC118936330 | NA | coding | upstream | 103958 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 108044 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 424435 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 635336 | 55166763 ~ 55255352 (-) |
| actr8 | actr8 | coding | upstream | 818717 | 55350144 ~ 55372295 (-) |
| G1389753 | LOC106566793 | non-coding | downstream | 262 | 54530624 ~ 54530955 (-) |
| G1389707 | NA | non-coding | downstream | 68450 | 54457221 ~ 54462767 (-) |
| G1389656 | NA | non-coding | downstream | 156145 | 54374841 ~ 54375072 (-) |
| G1389650 | NA | non-coding | downstream | 163062 | 54367944 ~ 54368155 (-) |
| G1389641 | NA | non-coding | downstream | 181603 | 54349377 ~ 54349614 (-) |
| G1389764 | NA | non-coding | upstream | 15418 | 54546845 ~ 54547138 (-) |
| G1389765 | LOC106566793 | non-coding | upstream | 18048 | 54549475 ~ 54549838 (-) |
| G1389769 | NA | non-coding | upstream | 20693 | 54552120 ~ 54556071 (-) |
| G1389766 | LOC106566794 | non-coding | upstream | 30075 | 54561502 ~ 54566568 (-) |
| G1389770 | NA | non-coding | upstream | 36716 | 54568143 ~ 54568364 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 798302 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 1498296 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1958910 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 2102458 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 2541222 | 51978399 ~ 51990025 (-) |
| G1389763 | NA | other | upstream | 13301 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 453391 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1292732 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1533076 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1693987 | 56225414 ~ 56226061 (-) |
