Gene
RNA
| Item | Value |
|---|---|
| gene id | G1389764 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 54546845 ~ 54547138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| helicase ARIP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587232 | True | 294 | lncRNA | 0.41 | 1 | 54546845 | 54547138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492306 | LOC106566792 | coding | downstream | 90829 | 54280345 ~ 54456016 (-) |
| LOC110491105 | LOC106566796 | coding | downstream | 309909 | 54163558 ~ 54236936 (-) |
| commd7 | comd7 | coding | downstream | 578710 | 53956911 ~ 53968135 (-) |
| LOC110491103 | LOC106566803 | coding | downstream | 627498 | 53776875 ~ 53919347 (-) |
| LOC110492300 | LOC106566804 | coding | downstream | 770644 | 53758360 ~ 53776201 (-) |
| LOC118936330 | NA | coding | upstream | 88247 | 54635385 ~ 54635876 (-) |
| LOC110491107 | NA | coding | upstream | 92333 | 54639471 ~ 54640714 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | upstream | 408724 | 54946478 ~ 54957989 (-) |
| sema3b | LOC106566773 | coding | upstream | 619625 | 55166763 ~ 55255352 (-) |
| actr8 | actr8 | coding | upstream | 803006 | 55350144 ~ 55372295 (-) |
| G1389754 | NA | non-coding | downstream | 15418 | 54531217 ~ 54531427 (-) |
| G1389753 | LOC106566793 | non-coding | downstream | 15890 | 54530624 ~ 54530955 (-) |
| G1389707 | NA | non-coding | downstream | 84078 | 54457221 ~ 54462767 (-) |
| G1389656 | NA | non-coding | downstream | 171773 | 54374841 ~ 54375072 (-) |
| G1389650 | NA | non-coding | downstream | 178690 | 54367944 ~ 54368155 (-) |
| G1389765 | LOC106566793 | non-coding | upstream | 2337 | 54549475 ~ 54549838 (-) |
| G1389769 | NA | non-coding | upstream | 4982 | 54552120 ~ 54556071 (-) |
| G1389766 | LOC106566794 | non-coding | upstream | 14364 | 54561502 ~ 54566568 (-) |
| G1389770 | NA | non-coding | upstream | 21005 | 54568143 ~ 54568364 (-) |
| G1389771 | NA | non-coding | upstream | 21453 | 54568591 ~ 54569290 (-) |
| G1389763 | NA | other | downstream | 1602 | 54544728 ~ 54545243 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 813930 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 1513924 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 1974538 | 52566433 ~ 52577143 (-) |
| spen | LOC106566857 | other | downstream | 2118086 | 52379551 ~ 52428869 (-) |
| G1390030 | ifrd2 | other | upstream | 437680 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 1277021 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 1517365 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 1678276 | 56225414 ~ 56226061 (-) |
| LOC110492371 | adcy6 | other | upstream | 1733914 | 56240763 ~ 56293503 (-) |
