G1389837


Basic Information

Item Value
gene id G1389837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54670026 ~ 54700613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1587312
GAtggtcatttgaatcagctgtgtagtgctagggcataAAACTAAAACATGCACCCAGGGGaccccaggaccaagtttgggagcCCCTGCTGTAGGCCACCTATCAGAGACAGACTAAGAACACTAATCTACATGtgatgtaaacaaacactgtacaaGCAAAACTAGTGCTCATTCCTTTCTCATCTTCCACACTGTCCTCAACATCTTCCTCTTCTTTTCCCCCCAGGCTTTACTGTATACATGTATATCCTAGCTCTCATAAAAGGAGGGATGATATCACTCTCAGGAGTCATGTCAGTAGGATCCTCTTTCACTGGAGCCTTGTGGAAGAATTTACTTGTGTTGGTTGTCCCCTACTGTAGTTGTGGGCTTGGCCTTTCTTTGAACTTTCTCAGTTTCCATTCT

Function

NR:

description
PREDICTED: DNA repair protein complementing XP-C cells

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1587312 True 408 lncRNA 0.45 2 54670026 54700613

Neighbor

gene id symbol gene type direction distance location
LOC110491107 NA coding downstream 29312 54639471 ~ 54640714 (-)
LOC118936330 NA coding downstream 34150 54635385 ~ 54635876 (-)
LOC110492306 LOC106566792 coding downstream 214010 54280345 ~ 54456016 (-)
LOC110491105 LOC106566796 coding downstream 433090 54163558 ~ 54236936 (-)
commd7 comd7 coding downstream 701891 53956911 ~ 53968135 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 255249 54946478 ~ 54957989 (-)
sema3b LOC106566773 coding upstream 466150 55166763 ~ 55255352 (-)
actr8 actr8 coding upstream 649531 55350144 ~ 55372295 (-)
LOC110492331 LOC106566684 coding upstream 675122 55375735 ~ 55383021 (-)
LOC110491111 LOC106566685 coding upstream 697024 55397637 ~ 55517109 (-)
G1389777 NA non-coding downstream 90200 54579622 ~ 54579826 (-)
G1389771 NA non-coding downstream 100736 54568591 ~ 54569290 (-)
G1389770 NA non-coding downstream 101662 54568143 ~ 54568364 (-)
G1389766 LOC106566794 non-coding downstream 103458 54561502 ~ 54566568 (-)
G1389769 NA non-coding downstream 113955 54552120 ~ 54556071 (-)
G1389861 NA non-coding upstream 10564 54711177 ~ 54718477 (-)
G1389871 NA non-coding upstream 35400 54736013 ~ 54757120 (-)
G1389935 NA non-coding upstream 112719 54813332 ~ 54821867 (-)
G1389985 NA non-coding upstream 187042 54887655 ~ 54887966 (-)
G1389986 NA non-coding upstream 188202 54888815 ~ 54889098 (-)
G1389763 NA other downstream 124783 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 937111 53730164 ~ 53757019 (-)
G1388236 NA other downstream 1637105 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 2097719 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 2241267 52379551 ~ 52428869 (-)
G1390030 ifrd2 other upstream 284205 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 1123546 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1363890 56064503 ~ 56064862 (-)
G1391624 NA other upstream 1524801 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 1580439 56240763 ~ 56293503 (-)

Expression


Co-expression Network