G1389985



Basic Information


Item Value
gene id G1389985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 54887655 ~ 54887966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1587464
gtacTTTGGtgccgaaaagtgcaaatcaatcccagaacaacagcaaaggacattgtgaagatgctggagcaaactggtacaaaagtatctatatccacagtaaaatgagtcctatatcgacataacctgaaaggccgctcagcaaggaagaagccactgctccaaaaccgccataaaaagccagattacggtttgcaactgcatatggggacatagatcatactttttggagaaatgtcttctggtctgatgaaacaaaaatagaactgtttggccataatgaccatcgttatgtttggaggagaaaggggg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1587464 True 312 lncRNA 0.42 1 54887655 54887966

Neighbor


gene id symbol gene type direction distance location
LOC110491107 NA coding downstream 246941 54639471 ~ 54640714 (-)
LOC118936330 NA coding downstream 251779 54635385 ~ 54635876 (-)
LOC110492306 LOC106566792 coding downstream 431639 54280345 ~ 54456016 (-)
LOC110491105 LOC106566796 coding downstream 650719 54163558 ~ 54236936 (-)
commd7 comd7 coding downstream 919520 53956911 ~ 53968135 (-)
si:dkey-20d21.12 LOC106566776 coding upstream 67896 54946478 ~ 54957989 (-)
sema3b LOC106566773 coding upstream 278797 55166763 ~ 55255352 (-)
actr8 actr8 coding upstream 462178 55350144 ~ 55372295 (-)
LOC110492331 LOC106566684 coding upstream 487769 55375735 ~ 55383021 (-)
LOC110491111 LOC106566685 coding upstream 509671 55397637 ~ 55517109 (-)
G1389935 NA non-coding downstream 65788 54813332 ~ 54821867 (-)
G1389871 NA non-coding downstream 130535 54736013 ~ 54757120 (-)
G1389861 NA non-coding downstream 169178 54711177 ~ 54718477 (-)
G1389837 NA non-coding downstream 187042 54670026 ~ 54700613 (-)
G1389841 LOC106566786 non-coding downstream 205320 54681331 ~ 54682335 (-)
G1389986 NA non-coding upstream 849 54888815 ~ 54889098 (-)
G1389961 NA non-coding upstream 22049 54910015 ~ 54914644 (-)
G1389999 NA non-coding upstream 27336 54915302 ~ 54915518 (-)
G1390004 NA non-coding upstream 34504 54922470 ~ 54922918 (-)
G1389967 LOC106572271 non-coding upstream 49718 54937684 ~ 54939641 (-)
G1389763 NA other downstream 342412 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 1154740 53730164 ~ 53757019 (-)
G1388236 NA other downstream 1854734 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 2315348 52566433 ~ 52577143 (-)
spen LOC106566857 other downstream 2458896 52379551 ~ 52428869 (-)
G1390030 ifrd2 other upstream 96852 54984818 ~ 54986263 (-)
LOC110492352 nua4l other upstream 936193 55824155 ~ 55826646 (-)
G1391586 NA other upstream 1176537 56064503 ~ 56064862 (-)
G1391624 NA other upstream 1337448 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 1393086 56240763 ~ 56293503 (-)

Expression



Co-expression Network