Gene
RNA
| Item | Value |
|---|---|
| gene id | G1390312 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55288711 ~ 55288981 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587844 | True | 271 | lncRNA | 0.37 | 1 | 55288711 | 55288981 |
55,286,400
55,286,800
55,287,200
55,287,600
55,288,000
55,288,400
55,288,800
55,289,200
55,289,600
55,290,000
55,290,400
55,290,800
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sema3b | LOC106566773 | coding | downstream | 33359 | 55166763 ~ 55255352 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | downstream | 330722 | 54946478 ~ 54957989 (-) |
| LOC110491107 | NA | coding | downstream | 647997 | 54639471 ~ 54640714 (-) |
| LOC118936330 | NA | coding | downstream | 652835 | 54635385 ~ 54635876 (-) |
| LOC110492306 | LOC106566792 | coding | downstream | 832695 | 54280345 ~ 54456016 (-) |
| actr8 | actr8 | coding | upstream | 61163 | 55350144 ~ 55372295 (-) |
| LOC110492331 | LOC106566684 | coding | upstream | 86754 | 55375735 ~ 55383021 (-) |
| LOC110491111 | LOC106566685 | coding | upstream | 108656 | 55397637 ~ 55517109 (-) |
| LOC110492334 | dkga | coding | upstream | 279396 | 55568377 ~ 55582222 (-) |
| LOC110492337 | sgk2 | coding | upstream | 306588 | 55595569 ~ 55607324 (-) |
| G1390303 | NA | non-coding | downstream | 12909 | 55275581 ~ 55275802 (-) |
| G1390301 | NA | non-coding | downstream | 18280 | 55270191 ~ 55270431 (-) |
| G1390253 | NA | non-coding | downstream | 125843 | 55162523 ~ 55162868 (-) |
| G1390252 | NA | non-coding | downstream | 128061 | 55160368 ~ 55160650 (-) |
| G1390346 | NA | non-coding | upstream | 27619 | 55316600 ~ 55316859 (-) |
| G1390350 | NA | non-coding | upstream | 28686 | 55317667 ~ 55317975 (-) |
| G1390371 | NA | non-coding | upstream | 56814 | 55345795 ~ 55346061 (-) |
| G1390645 | NA | non-coding | upstream | 103709 | 55392690 ~ 55429824 (-) |
| G1390692 | LOC106597055 | non-coding | upstream | 173070 | 55462051 ~ 55462661 (-) |
| G1390030 | ifrd2 | other | downstream | 302448 | 54984818 ~ 54986263 (-) |
| G1389763 | NA | other | downstream | 743468 | 54544728 ~ 54545243 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 1555796 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 2255790 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 2716404 | 52566433 ~ 52577143 (-) |
| LOC110492352 | nua4l | other | upstream | 535178 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 775522 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 936433 | 56225414 ~ 56226061 (-) |
| LOC110492371 | adcy6 | other | upstream | 992071 | 56240763 ~ 56293503 (-) |
| G1391796 | LOC100286403 | other | upstream | 1135291 | 56424272 ~ 56437279 (-) |
