Gene
RNA
| Item | Value |
|---|---|
| gene id | G1390376 |
| gene name | actr8 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55351200 ~ 55351729 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| actr8 | Predicted to enable ATP binding activity. Predicted to be involved in ATP-dependent chromatin remodeling; double-strand break repair; and regulation of transcription, DNA-templated. Predicted to act upstream of or within DNA metabolic process; cell division; and chromatin remodeling. Predicted to be located in chromosome and nucleus. Predicted to be part of Ino80 complex. Orthologous to human ACTR8 (actin related protein 8). |
| description |
|---|
| actin-related protein 8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587913 | True | 403 | TUCP | 0.58 | 2 | 55351200 | 55351729 |
55,348,800
55,349,200
55,349,600
55,350,000
55,350,400
55,350,800
55,351,200
55,351,600
55,352,000
55,352,400
55,352,800
55,353,200
55,353,600
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sema3bl | sema3g | coding | upstream | 212097 | 55072237 ~ 55139103 (+) |
| LOC110492913 | NA | coding | upstream | 358851 | 54989353 ~ 54992349 (+) |
| ifrd2 | ifrd2 | coding | upstream | 362502 | 54971324 ~ 55032425 (+) |
| LOC110492324 | LOC106566775 | coding | upstream | 382306 | 54958795 ~ 54968894 (+) |
| hyal3 | LOC106566776 | coding | upstream | 395473 | 54944723 ~ 54955727 (+) |
| LOC110492332 | LOC106566686 | coding | downstream | 165176 | 55516905 ~ 55535738 (+) |
| LOC110492333 | LOC106566687 | coding | downstream | 187577 | 55539306 ~ 55564300 (+) |
| LOC110492335 | catsperd | coding | downstream | 230388 | 55582117 ~ 55595490 (+) |
| LOC110492343 | LOC106566691 | coding | downstream | 302271 | 55654000 ~ 55661738 (+) |
| LOC110491113 | LOC106566694 | coding | downstream | 357538 | 55709267 ~ 55740977 (+) |
| G1390351 | NA | non-coding | upstream | 32513 | 55318477 ~ 55318687 (+) |
| G1390349 | NA | non-coding | upstream | 33124 | 55317827 ~ 55318076 (+) |
| G1390339 | NA | non-coding | upstream | 37619 | 55313295 ~ 55313581 (+) |
| G1390336 | NA | non-coding | upstream | 39788 | 55311165 ~ 55311412 (+) |
| G1390317 | NA | non-coding | upstream | 57128 | 55293752 ~ 55294072 (+) |
| G1390397 | NA | non-coding | downstream | 31453 | 55383182 ~ 55383419 (+) |
| G1390402 | NA | non-coding | downstream | 48132 | 55399861 ~ 55403953 (+) |
| G1390439 | NA | non-coding | downstream | 175420 | 55527149 ~ 55527530 (+) |
| G1390438 | NA | non-coding | downstream | 185372 | 55537101 ~ 55537705 (+) |
| LOC110492320 | LOC106566780 | other | upstream | 568852 | 54769016 ~ 54821566 (+) |
| G1388919 | LOC106566792 | other | upstream | 1044292 | 54306450 ~ 54306908 (+) |
| G1388917 | LOC106566792 | other | upstream | 1049042 | 54299174 ~ 54302158 (+) |
| G1388806 | NA | other | upstream | 1121339 | 54163086 ~ 54229861 (+) |
| LOC110492303 | LOC106566801 | other | upstream | 1301458 | 54045935 ~ 54061849 (+) |
| G1390386 | LOC106566684 | other | downstream | 12739 | 55364468 ~ 55381360 (+) |
| G1390473 | NA | other | downstream | 176864 | 55528593 ~ 55529648 (+) |
| G1390508 | NA | other | downstream | 276965 | 55628694 ~ 55632838 (+) |
| G1390527 | NA | other | downstream | 288293 | 55640022 ~ 55640299 (+) |
| G1390616 | LOC106566696 | other | downstream | 441295 | 55793024 ~ 55823192 (+) |
