Gene
RNA
| Item | Value |
|---|---|
| gene id | G1390692 |
| gene name | LOC106597055 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55462051 ~ 55462661 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106597055, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1588277 | True | 521 | lncRNA | 0.53 | 2 | 55462051 | 55462661 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492331 | LOC106566684 | coding | downstream | 79030 | 55375735 ~ 55383021 (-) |
| actr8 | actr8 | coding | downstream | 89756 | 55350144 ~ 55372295 (-) |
| sema3b | LOC106566773 | coding | downstream | 206699 | 55166763 ~ 55255352 (-) |
| si:dkey-20d21.12 | LOC106566776 | coding | downstream | 504062 | 54946478 ~ 54957989 (-) |
| LOC110491107 | NA | coding | downstream | 821337 | 54639471 ~ 54640714 (-) |
| LOC110492334 | dkga | coding | upstream | 105716 | 55568377 ~ 55582222 (-) |
| LOC110492337 | sgk2 | coding | upstream | 132908 | 55595569 ~ 55607324 (-) |
| LOC110492338 | LOC106566690 | coding | upstream | 146526 | 55609187 ~ 55626735 (-) |
| LOC110492341 | LOC106571981 | coding | upstream | 164254 | 55626915 ~ 55632905 (-) |
| LOC110492339 | rae1 | coding | upstream | 171153 | 55633814 ~ 55638471 (-) |
| G1390645 | NA | non-coding | downstream | 32227 | 55392690 ~ 55429824 (-) |
| G1390371 | NA | non-coding | downstream | 115990 | 55345795 ~ 55346061 (-) |
| G1390350 | NA | non-coding | downstream | 144076 | 55317667 ~ 55317975 (-) |
| G1390346 | NA | non-coding | downstream | 145192 | 55316600 ~ 55316859 (-) |
| G1390312 | NA | non-coding | downstream | 173070 | 55288711 ~ 55288981 (-) |
| G1390752 | NA | non-coding | upstream | 67046 | 55529707 ~ 55530272 (-) |
| G1390754 | LOC106566686 | non-coding | upstream | 70542 | 55533203 ~ 55533715 (-) |
| G1390756 | NA | non-coding | upstream | 74078 | 55536739 ~ 55536983 (-) |
| G1390755 | NA | non-coding | upstream | 74530 | 55537191 ~ 55537704 (-) |
| G1390744 | NA | non-coding | upstream | 101869 | 55564530 ~ 55566248 (-) |
| G1390030 | ifrd2 | other | downstream | 475788 | 54984818 ~ 54986263 (-) |
| G1389763 | NA | other | downstream | 916808 | 54544728 ~ 54545243 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 1729136 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 2429130 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 2889744 | 52566433 ~ 52577143 (-) |
| LOC110492352 | nua4l | other | upstream | 361498 | 55824155 ~ 55826646 (-) |
| G1391586 | NA | other | upstream | 601842 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 762753 | 56225414 ~ 56226061 (-) |
| LOC110492371 | adcy6 | other | upstream | 818391 | 56240763 ~ 56293503 (-) |
| G1391796 | LOC100286403 | other | upstream | 961611 | 56424272 ~ 56437279 (-) |
