Gene
RNA
| Item | Value |
|---|---|
| gene id | G1390439 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55527149 ~ 55527530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1587989 | True | 382 | lncRNA | 0.41 | 1 | 55527149 | 55527530 |
55,525,200
55,525,600
55,526,000
55,526,400
55,526,800
55,527,200
55,527,600
55,528,000
55,528,400
55,528,800
55,529,200
55,529,600
55,530,000
NC_048580.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sema3bl | sema3g | coding | upstream | 388046 | 55072237 ~ 55139103 (+) |
| LOC110492913 | NA | coding | upstream | 534800 | 54989353 ~ 54992349 (+) |
| ifrd2 | ifrd2 | coding | upstream | 538451 | 54971324 ~ 55032425 (+) |
| LOC110492324 | LOC106566775 | coding | upstream | 558255 | 54958795 ~ 54968894 (+) |
| LOC110492326 | nat6 | coding | upstream | 577386 | 54948079 ~ 54949763 (+) |
| LOC110492333 | LOC106566687 | coding | downstream | 11776 | 55539306 ~ 55564300 (+) |
| LOC110492335 | catsperd | coding | downstream | 54587 | 55582117 ~ 55595490 (+) |
| LOC110492343 | LOC106566691 | coding | downstream | 126470 | 55654000 ~ 55661738 (+) |
| LOC110491113 | LOC106566694 | coding | downstream | 181737 | 55709267 ~ 55740977 (+) |
| LOC110492345 | prelid3b | coding | downstream | 220400 | 55747930 ~ 55750490 (+) |
| LOC110492332 | LOC106566686 | non-coding | upstream | 280 | 55516905 ~ 55535738 (+) |
| G1390402 | NA | non-coding | upstream | 123196 | 55399861 ~ 55403953 (+) |
| G1390397 | NA | non-coding | upstream | 143730 | 55383182 ~ 55383419 (+) |
| G1390351 | NA | non-coding | upstream | 208462 | 55318477 ~ 55318687 (+) |
| G1390349 | NA | non-coding | upstream | 209073 | 55317827 ~ 55318076 (+) |
| G1390438 | NA | non-coding | downstream | 9571 | 55537101 ~ 55537705 (+) |
| G1390479 | NA | non-coding | downstream | 38030 | 55565560 ~ 55566294 (+) |
| G1390480 | NA | non-coding | downstream | 39333 | 55566863 ~ 55567798 (+) |
| G1390492 | dkga | non-coding | downstream | 42847 | 55570377 ~ 55572173 (+) |
| G1390499 | NA | non-coding | downstream | 51929 | 55579459 ~ 55579670 (+) |
| G1390386 | LOC106566684 | other | upstream | 145789 | 55364468 ~ 55381360 (+) |
| G1390376 | actr8 | other | upstream | 175420 | 55351200 ~ 55351729 (+) |
| LOC110492320 | LOC106566780 | other | upstream | 744801 | 54769016 ~ 54821566 (+) |
| G1388919 | LOC106566792 | other | upstream | 1220241 | 54306450 ~ 54306908 (+) |
| G1388917 | LOC106566792 | other | upstream | 1224991 | 54299174 ~ 54302158 (+) |
| G1390473 | NA | other | downstream | 1063 | 55528593 ~ 55529648 (+) |
| G1390508 | NA | other | downstream | 101164 | 55628694 ~ 55632838 (+) |
| G1390527 | NA | other | downstream | 112492 | 55640022 ~ 55640299 (+) |
| G1390616 | LOC106566696 | other | downstream | 265494 | 55793024 ~ 55823192 (+) |
| G1391254 | NA | other | downstream | 718985 | 56246515 ~ 56247620 (+) |
