Gene
RNA
| Item | Value |
|---|---|
| gene id | G1390817 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55666507 ~ 55666872 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| conserved oligomeric Golgi complex subunit 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1588406 | True | 366 | lncRNA | 0.35 | 1 | 55666507 | 55666872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492342 | LOC106566692 | coding | downstream | 17092 | 55646145 ~ 55649415 (-) |
| LOC110492339 | rae1 | coding | downstream | 28036 | 55633814 ~ 55638471 (-) |
| LOC110492341 | LOC106571981 | coding | downstream | 33602 | 55626915 ~ 55632905 (-) |
| LOC110492338 | LOC106566690 | coding | downstream | 39772 | 55609187 ~ 55626735 (-) |
| LOC110492337 | sgk2 | coding | downstream | 59183 | 55595569 ~ 55607324 (-) |
| LOC100170209 | LOC100170209 | coding | upstream | 4592 | 55671464 ~ 55692812 (-) |
| LOC110492344 | NA | coding | upstream | 75396 | 55742140 ~ 55745483 (-) |
| LOC110492346 | bpi | coding | upstream | 88258 | 55755130 ~ 55769029 (-) |
| LOC110492348 | viaat | coding | upstream | 116936 | 55783808 ~ 55787739 (-) |
| LOC110492352 | nua4l | coding | upstream | 157283 | 55824155 ~ 55826646 (-) |
| G1390797 | NA | non-coding | downstream | 52540 | 55602174 ~ 55613967 (-) |
| G1390777 | NA | non-coding | downstream | 85606 | 55580207 ~ 55580901 (-) |
| G1390772 | NA | non-coding | downstream | 91204 | 55574956 ~ 55575303 (-) |
| G1390771 | NA | non-coding | downstream | 91699 | 55574529 ~ 55574808 (-) |
| G1390745 | NA | non-coding | downstream | 98710 | 55566446 ~ 55567797 (-) |
| G1390818 | NA | non-coding | upstream | 256 | 55667128 ~ 55667643 (-) |
| G1390841 | LOC106613263 | non-coding | upstream | 48370 | 55715242 ~ 55715658 (-) |
| G1390845 | NA | non-coding | upstream | 52660 | 55719532 ~ 55719754 (-) |
| G1390850 | NA | non-coding | upstream | 60643 | 55727515 ~ 55727835 (-) |
| G1390853 | NA | non-coding | upstream | 62834 | 55729706 ~ 55729927 (-) |
| G1390030 | ifrd2 | other | downstream | 680244 | 54984818 ~ 54986263 (-) |
| G1389763 | NA | other | downstream | 1121264 | 54544728 ~ 54545243 (-) |
| LOC110492299 | LOC106566805 | other | downstream | 1933592 | 53730164 ~ 53757019 (-) |
| G1388236 | NA | other | downstream | 2633586 | 53031932 ~ 53032921 (-) |
| LOC110492250 | LOC106566852 | other | downstream | 3094200 | 52566433 ~ 52577143 (-) |
| G1391586 | NA | other | upstream | 397631 | 56064503 ~ 56064862 (-) |
| G1391624 | NA | other | upstream | 558542 | 56225414 ~ 56226061 (-) |
| LOC110492371 | adcy6 | other | upstream | 614180 | 56240763 ~ 56293503 (-) |
| G1391796 | LOC100286403 | other | upstream | 757400 | 56424272 ~ 56437279 (-) |
