G1390850



Basic Information


Item Value
gene id G1390850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55727515 ~ 55727835 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1588440
gtGTTAATGTGATTATCAGTCACACTTACGGAGATCATAGCCTTTGATTGTACAGACCATGCTGAAGGCCTGAATTAGCCAGCAACCATTCTTCAACAGGCTGTCCAGATAAGCACATGAGCCAAGCTGTGGACACACATACAGCAAGACAGATAGCTCAGAGGAGACAGAAGATGGGACATGAGACACTGATAGTCAGTAAGTGAAGCTGTTACATTAGCATCAAAGAATGAAGACTAGATTAGTGcatgttacggatacaggtatcctgtgtgtgtgtgtatcctgtgtgtttcttttctctccgtctcccctcacagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1588440 True 321 lncRNA 0.45 1 55727515 55727835

Neighbor


gene id symbol gene type direction distance location
LOC100170209 LOC100170209 coding downstream 34703 55671464 ~ 55692812 (-)
LOC110492342 LOC106566692 coding downstream 78100 55646145 ~ 55649415 (-)
LOC110492339 rae1 coding downstream 89044 55633814 ~ 55638471 (-)
LOC110492341 LOC106571981 coding downstream 94610 55626915 ~ 55632905 (-)
LOC110492338 LOC106566690 coding downstream 100780 55609187 ~ 55626735 (-)
LOC110492344 NA coding upstream 14433 55742140 ~ 55745483 (-)
LOC110492346 bpi coding upstream 27295 55755130 ~ 55769029 (-)
LOC110492348 viaat coding upstream 55973 55783808 ~ 55787739 (-)
LOC110492352 nua4l coding upstream 96320 55824155 ~ 55826646 (-)
LOC110492353 nua4l coding upstream 116850 55844681 ~ 55847496 (-)
G1390845 NA non-coding downstream 7761 55719532 ~ 55719754 (-)
G1390841 LOC106613263 non-coding downstream 11857 55715242 ~ 55715658 (-)
G1390818 NA non-coding downstream 59872 55667128 ~ 55667643 (-)
G1390817 NA non-coding downstream 60643 55666507 ~ 55666872 (-)
G1390797 NA non-coding downstream 113548 55602174 ~ 55613967 (-)
G1390853 NA non-coding upstream 1871 55729706 ~ 55729927 (-)
G1390854 NA non-coding upstream 2970 55730805 ~ 55731077 (-)
G1390855 LOC106566694 non-coding upstream 3403 55731238 ~ 55731490 (-)
G1390856 NA non-coding upstream 5338 55733173 ~ 55733373 (-)
G1390030 ifrd2 other downstream 741252 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1182272 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 1994600 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2694594 53031932 ~ 53032921 (-)
LOC110492250 LOC106566852 other downstream 3155208 52566433 ~ 52577143 (-)
G1391586 NA other upstream 336668 56064503 ~ 56064862 (-)
G1391624 NA other upstream 497579 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 553217 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 696437 56424272 ~ 56437279 (-)

Expression



Co-expression Network