G1391097 (LOC106566704)


Basic Information

Item Value
gene id G1391097
gene name LOC106566704
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 55930006 ~ 55933691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1588718
CGTGAGTTCAcattgtgtcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttatgtgtgtgtttatgtgtgtgttcagACTTACGACAGCTCCTCCAGCCGCTCGCTCTTGCTGCTGTCCACGCTCTTCAGACGGTCAAAGTCGGCAAGCACCTGAGCCAACTCAATCTGCAGCTTCTGGTtatgaTCAGTGAGGTCATCGATGATCCTCTGCTTCTCGTTGATCTCATCCCGGAGACGGGCCATCTGCATGTGGTGCAGACCACGGTGAGACTCCTCCCCCTGCTGCCGAGGAACCTTCTTGACGTTGCCCTCCTCAGTCTCacccttctctccatccttctcttcaAGCAGAGAGTTATCTGTAACATAGAAATAGATCTATAAGATATGTTTTCCCACCTGGGTCCATGAGCCTGGCTGATGTGAGGGTGGATGATGTGTACAGGTGTGTTACCTGAGTCCTGTAGCCTGGCTGATGTGAGGGTGAAGggtgtgtacagGTATGTTACTTGGGTCCTGTAGCCTGGCTGAAGTGAGGGTGGAGGGTGTGTACAGGTGTGATACCTGAGTCCTGTAGCCTGGCTGATGTGAGGGTGGAGGGTGTGTACAGgtgtgttaCAGGTATATAGCGATGTGTTACCTTGGTCCTGCAGCTTGGCCAGCTCCTCGCTGAGGGAGTCGTGGCTCTCCTCCAGCATCCTCTTCTTTAGCTCTACACTCTGCATGTACTCTGTCAAAGACCGGATCTTGGCTTCATGCTGCGAACACCCCAAACAGAGTCACTCAGCTGACGTGGCACACTACACTCCCATCTATACAGTTTAGAAAATGTACAAAGTCTCTAAAGTTTGTCAATGACATGAGGGAAGAATGTTGTCATAGTGTGCAGTGGTAAagtgtatctactgtatgtatacacGGTATCAACATACCCTATGTATTTCTACACATATGCTGTGTATAGTCATTCTAGAAAGTTGTGATGTTGATACTGAGGTGCCCAGTAGAGCTGGAGGCTGACCTGTGAGATGAGGAGCTGGCAGGAGGAGAGCTCGCGGCCTGTCTCCTCCATTTTGCGATGACACTCCAGCTGCAGGTTCTCCAGCTGGCGACAGCGCTTCACCATGGACTTGACCTCCGACTTGATCTTACTGATGTAGAGACGGGCCACTGTGAACTCCTCCTCGATCGCCCCGCTGATCTCCACCggctacagcTTGATCTCCCCGTTGCCCACGATGGTGCTGAACTCACTTAGGTCCCTCATCAGGCCGTTGAGGACGTCAGCGATGCGCTTCCTCTGCTGACCACTCACTTCCTGCATGTGGGATAGCTCCGCCTCCAGCTCCATCAGACTGGCCTTCTGGGCCAACTGGTCGGCCAGCAGCTGGTTCTGCAGgcccttctcctccacctcctggcTCTTCTGGTCATAGTTGATGGCCAGCTCCTCCAGGGCCTGCAGCACCTCTTTCACCTCTGTCTTGGCACAGCTGCTCTCCACCTGCAGACGACCCAGCTCTGCCTGCACCTTGTCCCCATCCCCACGAGAAGATGCcagcag

Function

NR:

description
kinesin heavy chain-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1588718 True 1594 lncRNA 0.53 8 55930006 55933691

Neighbor

gene id symbol gene type direction distance location
LOC110492355 LOC106566701 coding downstream 21966 55896186 ~ 55908040 (-)
LOC110492354 LOC106566769 coding downstream 41647 55885383 ~ 55888359 (-)
LOC110492353 nua4l coding downstream 82510 55844681 ~ 55847496 (-)
LOC110492352 nua4l coding downstream 103360 55824155 ~ 55826646 (-)
LOC110492348 viaat coding downstream 142267 55783808 ~ 55787739 (-)
LOC110492359 LOC106566705 coding upstream 21349 55955040 ~ 55965473 (-)
LOC110492360 LOC106566706 coding upstream 52513 55986204 ~ 55998076 (-)
LOC110491116 LOC106566709 coding upstream 75497 56009188 ~ 56036787 (-)
LOC110492365 spry4 coding upstream 142512 56076203 ~ 56078237 (-)
LOC110492369 g6pd coding upstream 273121 56206812 ~ 56221578 (-)
G1391086 LOC106566702 non-coding downstream 14239 55913637 ~ 55915767 (-)
G1390914 NA non-coding downstream 81619 55848160 ~ 55848387 (-)
G1390893 NA non-coding downstream 116919 55811645 ~ 55813087 (-)
G1390888 NA non-coding downstream 125331 55798217 ~ 55804675 (-)
G1391102 NA non-coding upstream 9485 55943176 ~ 56001631 (-)
G1391127 NA non-coding upstream 72983 56006674 ~ 56008753 (-)
G1391597 NA non-coding upstream 152414 56086105 ~ 56086321 (-)
G1391621 NA non-coding upstream 289844 56223535 ~ 56223853 (-)
G1390030 ifrd2 other downstream 943743 54984818 ~ 54986263 (-)
G1389763 NA other downstream 1384763 54544728 ~ 54545243 (-)
LOC110492299 LOC106566805 other downstream 2197091 53730164 ~ 53757019 (-)
G1388236 NA other downstream 2897085 53031932 ~ 53032921 (-)
G1391586 NA other upstream 130812 56064503 ~ 56064862 (-)
G1391624 NA other upstream 291723 56225414 ~ 56226061 (-)
LOC110492371 adcy6 other upstream 347361 56240763 ~ 56293503 (-)
G1391796 LOC100286403 other upstream 490581 56424272 ~ 56437279 (-)
G1391869 NA other upstream 604901 56538592 ~ 56540929 (-)

Expression


Co-expression Network