G1391252


Basic Information

Item Value
gene id G1391252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56245741 ~ 56246017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1588880
CTCCACTATGTTCTGCTGTAGTCAAGGTAGAGGAGTGCCCCTCTGTAGGCCCATGGTACCTGTAGCTTCCAGAGGAAGTCGAGGCGTGAAGTGGACTCCACCTGCTGGGCATGGAGGTAGAGCGCCAGCACAAACACAGTGAGAATCACAGGAGTCATGACTCTCAGAGATACTTTGGTCACACTGAACGGGCTGCAGAGAGACAGTTAGAAAGAAAGGTCAGAGAGGCACAAACCaaactgcagagagagagtggatcagagaaagagaaaatggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1588880 True 277 lncRNA 0.52 1 56245741 56246017

Neighbor

gene id symbol gene type direction distance location
LOC118939557 NA coding upstream 5968 56237795 ~ 56239773 (+)
LOC110492370 LOC106566713 coding upstream 39440 56189995 ~ 56206301 (+)
LOC110492366 LOC106566712 coding upstream 56618 56091258 ~ 56189123 (+)
LOC110492364 LOC106566711 coding upstream 170340 56055330 ~ 56075401 (+)
LOC110492363 aaas coding upstream 236966 55998512 ~ 56008775 (+)
LOC110491117 NA coding downstream 64592 56310609 ~ 56322498 (+)
prim1 prim1 coding downstream 154033 56400050 ~ 56412393 (+)
LOC110492373 LOC100286403 coding downstream 178170 56424187 ~ 56437287 (+)
LOC118939611 NA coding downstream 189566 56435583 ~ 56435653 (+)
LOC118939608 NA coding downstream 190579 56436596 ~ 56436669 (+)
G1391251 adcy6 non-coding upstream 70 56245434 ~ 56245671 (+)
G1391249 NA non-coding upstream 21174 56224275 ~ 56224567 (+)
G1391165 NA non-coding upstream 157369 56088072 ~ 56088372 (+)
G1391161 NA non-coding upstream 176817 56068689 ~ 56068924 (+)
G1391160 NA non-coding upstream 177890 56067571 ~ 56067851 (+)
G1391253 NA non-coding downstream 66 56246083 ~ 56246354 (+)
G1391254 NA non-coding downstream 963 56246515 ~ 56247620 (+)
G1391255 NA non-coding downstream 1948 56247965 ~ 56248195 (+)
G1391256 NA non-coding downstream 2348 56248365 ~ 56248658 (+)
G1391303 NA non-coding downstream 77428 56323445 ~ 56323660 (+)
G1390616 LOC106566696 other upstream 422549 55793024 ~ 55823192 (+)
G1390527 NA other upstream 605442 55640022 ~ 55640299 (+)
G1390508 NA other upstream 612903 55628694 ~ 55632838 (+)
G1390473 NA other upstream 716093 55528593 ~ 55529648 (+)
G1390386 LOC106566684 other upstream 864381 55364468 ~ 55381360 (+)
LOC118939462 LOC106566730 other downstream 534044 56779988 ~ 56790929 (+)
G1392601 NA other downstream 1119934 57365951 ~ 57366517 (+)
G1392616 NA other downstream 1150923 57396940 ~ 57397177 (+)
G1392617 NA other downstream 1155468 57401485 ~ 57402530 (+)

Expression


Co-expression Network