G1391307


Basic Information

Item Value
gene id G1391307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56329859 ~ 56330076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1588944
ctcttggcattcgctcaaccagcttcatgaggtagtgcaatttaattaacaggtgtgccttgttaaaagtacatttgtggaatttctttccttcttaatgcatttgagccaatcagttgtgttgtgacaaggtaggggtggtaaacagaagatagccctggcaaaagaccaattccatattttgtcaagaacagctcaaataggcaaagTGAAATGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1588944 True 218 lncRNA 0.40 1 56329859 56330076

Neighbor

gene id symbol gene type direction distance location
LOC110491117 NA coding upstream 7361 56310609 ~ 56322498 (+)
LOC118939557 NA coding upstream 90086 56237795 ~ 56239773 (+)
LOC110492370 LOC106566713 coding upstream 123558 56189995 ~ 56206301 (+)
LOC110492366 LOC106566712 coding upstream 140736 56091258 ~ 56189123 (+)
LOC110492364 LOC106566711 coding upstream 254458 56055330 ~ 56075401 (+)
prim1 prim1 coding downstream 69974 56400050 ~ 56412393 (+)
LOC110492373 LOC100286403 coding downstream 94111 56424187 ~ 56437287 (+)
LOC118939611 NA coding downstream 105507 56435583 ~ 56435653 (+)
LOC118939608 NA coding downstream 106520 56436596 ~ 56436669 (+)
LOC118939609 NA coding downstream 106951 56437027 ~ 56437100 (+)
G1391303 NA non-coding upstream 6199 56323445 ~ 56323660 (+)
G1391256 NA non-coding upstream 81201 56248365 ~ 56248658 (+)
G1391255 NA non-coding upstream 81664 56247965 ~ 56248195 (+)
G1391254 NA non-coding upstream 82239 56246515 ~ 56247620 (+)
G1391253 NA non-coding upstream 83505 56246083 ~ 56246354 (+)
G1391318 NA non-coding downstream 20920 56350996 ~ 56352432 (+)
G1391327 NA non-coding downstream 30551 56360627 ~ 56362061 (+)
G1391370 NA non-coding downstream 93345 56423421 ~ 56423733 (+)
G1391363 NA non-coding downstream 127827 56457903 ~ 56459321 (+)
G1391364 NA non-coding downstream 135021 56465097 ~ 56465424 (+)
G1390616 LOC106566696 other upstream 506667 55793024 ~ 55823192 (+)
G1390527 NA other upstream 689560 55640022 ~ 55640299 (+)
G1390508 NA other upstream 697021 55628694 ~ 55632838 (+)
G1390473 NA other upstream 800211 55528593 ~ 55529648 (+)
LOC118939462 LOC106566730 other downstream 449985 56779988 ~ 56790929 (+)
G1392601 NA other downstream 1035875 57365951 ~ 57366517 (+)
G1392616 NA other downstream 1066864 57396940 ~ 57397177 (+)
G1392617 NA other downstream 1071409 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 2089310 58419386 ~ 58423502 (+)

Expression


Co-expression Network