G1391318


Basic Information

Item Value
gene id G1391318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56350996 ~ 56352432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1588955
GCGAGCTTTATTCAGAACCAAAGAGAAAACTTATGGATGGAAAAAAAAATCTATGTCCATTCAAATGAAGAATTCTACCCCAAAATTTACAGTCAAAAATAAAACGACAACATTGAGCAATACAGTATTTCATTAATAAATTAAGTTGAAGCCATTTTACTTAACACAAACACTGAGTTTTGTTCCAACAGCATTCTTTTTGGAGCTTTACAAATGGCATATAAAGCAGGATATGTACAACCAGACATGGTCTGTTCTTAGCAAAGGAGTGGGAGCAGAAACAGTATGACGGCTGTATATTCAGTCTGAACAGTGTTTCAGTCACTCCAGGCAGATTTGGATCTGGATCTTATTCACTCACTGCTGGGAACTGAGGTTATAAAAGATACTCAAATTGCTTTTTTTGTTCTGACACAAGCCACTGAGCTGCCACTGAGTTCGGAGGCTTCAAATTAGTttttcagatatttttcagatgtttttcagcagtgCACTACTAACTGAAATGTCCAGCCGTCACCTTAGCAGTGGTCTCATGCTACAAATGAAAGGTGAAAcgcacctggttaaataaaggtgaaataaataaataaaaaactgttggagccctctttcttttctctcagAGCCAGAAACTGCACCCATCATCACAATTCTGCTGACTTCTGCCACTGCTCACACAGTTGCTAAGCAACCCTTAAATTCCAGTGTTCTGTAAGTCCAAACAACTCAGAGCTCCTGTCTGTGCAAATCATGAAGTCCTCTATTAGCCGGGTCGTAGACAGCTCCTAATACAAGATGACTTCAGTGAGtacaacaacaatgacaaaaaaaGCAACTACAATTAAAAAGGACTGGGCAGAAAGCAGATTACAAATGTGAAGAATACTGAAAAATATAAATCACCTTATACTTAAAAGATTTCAAAGCAAAACAAACTGAAAAATAACTTACTTTGGACAGGACCAGCCCGTTAGTTGTTTCGGCTCAAATTCACCCATCCCACCCACGCCCAACCCTCACAGACCCTTTACCCAATTTCTTACACTCTCCACTAAATATGAATGAGAGACCCATCTTTGTAAAGGCCTTGATCCTGTACTCTCATCAATAATGGCCAGCCACACTACAAGAATGACAACTCCAGAGAGTCATCCCAGGTGATCAATTGTGGAACATGAAGGAGACTTATTTTTCagtctctgaatcagagaggtgtggggggctgccataattgaCATTCACTTTTTCAGCGCCCGAGGAacaggggttaactgccttgctcagaatttttacagatttttaccttgtcagctcagggattcgatccagcaacctttcggttactggcccaacgctctaaccactgggctacctaccacgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1588955 True 1437 lncRNA 0.41 1 56350996 56352432

Neighbor

gene id symbol gene type direction distance location
LOC110491117 NA coding upstream 28498 56310609 ~ 56322498 (+)
LOC118939557 NA coding upstream 111223 56237795 ~ 56239773 (+)
LOC110492370 LOC106566713 coding upstream 144695 56189995 ~ 56206301 (+)
LOC110492366 LOC106566712 coding upstream 161873 56091258 ~ 56189123 (+)
LOC110492364 LOC106566711 coding upstream 275595 56055330 ~ 56075401 (+)
prim1 prim1 coding downstream 47618 56400050 ~ 56412393 (+)
LOC110492373 LOC100286403 coding downstream 71755 56424187 ~ 56437287 (+)
LOC118939611 NA coding downstream 83151 56435583 ~ 56435653 (+)
LOC118939608 NA coding downstream 84164 56436596 ~ 56436669 (+)
LOC118939609 NA coding downstream 84595 56437027 ~ 56437100 (+)
G1391307 NA non-coding upstream 20920 56329859 ~ 56330076 (+)
G1391303 NA non-coding upstream 27336 56323445 ~ 56323660 (+)
G1391256 NA non-coding upstream 102338 56248365 ~ 56248658 (+)
G1391255 NA non-coding upstream 102801 56247965 ~ 56248195 (+)
G1391254 NA non-coding upstream 103376 56246515 ~ 56247620 (+)
G1391327 NA non-coding downstream 8195 56360627 ~ 56362061 (+)
G1391370 NA non-coding downstream 70989 56423421 ~ 56423733 (+)
G1391363 NA non-coding downstream 105471 56457903 ~ 56459321 (+)
G1391364 NA non-coding downstream 112665 56465097 ~ 56465424 (+)
G1391358 NA non-coding downstream 119863 56472295 ~ 56473635 (+)
G1390616 LOC106566696 other upstream 527804 55793024 ~ 55823192 (+)
G1390527 NA other upstream 710697 55640022 ~ 55640299 (+)
G1390508 NA other upstream 718158 55628694 ~ 55632838 (+)
G1390473 NA other upstream 821348 55528593 ~ 55529648 (+)
LOC118939462 LOC106566730 other downstream 427629 56779988 ~ 56790929 (+)
G1392601 NA other downstream 1013519 57365951 ~ 57366517 (+)
G1392616 NA other downstream 1044508 57396940 ~ 57397177 (+)
G1392617 NA other downstream 1049053 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 2066954 58419386 ~ 58423502 (+)

Expression


Co-expression Network