G1391363


Basic Information

Item Value
gene id G1391363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56457903 ~ 56459321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589002
CGTTTTTGAAAAGACACTGCTTTCAGTGGTGTGACTTTTCATACATTGGAAATGGGAGGACATGGCTACTGTACTTAATTAATCactgtttaccaaaacaaatGACCAAGAATACTGCATAGAGGTGTGTTTCTCAACCATCTCAAGACATCTGATCAGCTTCTCACTGTAGGTAAATAGCCTAGAAATAATTCTGCTCCATGTTTGCTTTcatttagatttgggtatgtcattttaggagagGATTTAAAAAAGGGGGTGGATCCTTTATCACTCACCCACCCCTTCCCTAAAATGAATGCTCTGCGCCCCAGCACCAGAGGGGGTTGTACATACACCAGAGCTTGCGTGCGCGCTAGTTCCCTTTTATTTATAGGCTACATAACCTGGTCTAATCAACGTTTGAGTATATATTGTACCGTTGGTTATCAAAATAGGTTCTTTCAGTATGAAAAGTTGGAAATGTTCTTGTGAAATAGAGAGAATGACATCACTGACCGACATGCAGATGACCACCTGCTACCATAGGACATAGGGAAGGGTAAAATATGGCCAACAAACTGTTTGTATAAAAACATTCAATGTAGTTAATGTACAATCATATGCCTAATTGATTACAATAACATTTGAACAGGGCCATATAATAGTATACTGTGGGGAAAAATGGCACAACATACAATTTCATTTGTCTGGCAATTTGTAATGTTTATGAATTAAACGTCACCCTCCCAACTCCGCGCCATCTCAGCATCACTTTCTGTAGCAGCATTCTGACCAGACACCTTTTGCGCTCTAATGATTCCAAGAGACATCCCATTCGGTCCTTGAGCCGGCCTTTGTCTTCGGTATTGAATGAGAATAATTAAATAGTTGTGCCTTGAAAGATGTGTAAAACGATTAGGAACTGCGAGACAATAGGGGGTTGCGCGTTGAAAGAGCAGGTGATCACATGAGACATAAACATAAAATCCAGATGGAGCTGAATGATGATTAGTCGAttaatcaggctgtaatacacaaaTACTTGATATGTACAGCCTGAAACTAATGTCAGCAAAATCGTGTAAATGTTCCTCACAAGCCAGAATGTtcaataaaattacatttaaacttaCTCTATCGGTTGTCTATGTGGTCTGCTCTTCAGCTGCTTGAAATTTGAGACAATATATACGGTAAAGTATTGTAATATACTTTTACATGATTTTGCAGTCATTTCCCCTATTAATCTGTAATTACACTAACATGCATACCTATTTTTAAATTACATGGTATACCTGGATTTTTGTGTGTAGTCTAAAAGTACAGGTAGGCCCTACATCCaattatttacagtgcatttggaaagtattcaaacaccttcactttttccacattttacattacagccttattctaaaattgtttaaattgtttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589002 True 1419 lncRNA 0.37 1 56457903 56459321

Neighbor

gene id symbol gene type direction distance location
LOC110492374 ptges3 coding upstream 183 56450915 ~ 56457720 (+)
LOC110492373 LOC100286403 coding upstream 20616 56424187 ~ 56437287 (+)
LOC118939609 NA coding upstream 20803 56437027 ~ 56437100 (+)
LOC118939608 NA coding upstream 21234 56436596 ~ 56436669 (+)
LOC118939611 NA coding upstream 22250 56435583 ~ 56435653 (+)
LOC110492376 baz2a coding downstream 3184 56462505 ~ 56471950 (+)
LOC110492375 baz2a coding downstream 15089 56474410 ~ 56507995 (+)
LOC118939476 NA coding downstream 65598 56524919 ~ 56526061 (+)
LOC110492377 LOC106566726 coding downstream 77346 56536667 ~ 56540132 (+)
LOC110492382 LOC100195767 coding downstream 270178 56729499 ~ 56762482 (+)
G1391370 NA non-coding upstream 34170 56423421 ~ 56423733 (+)
G1391327 NA non-coding upstream 95842 56360627 ~ 56362061 (+)
G1391318 NA non-coding upstream 105471 56350996 ~ 56352432 (+)
G1391307 NA non-coding upstream 127827 56329859 ~ 56330076 (+)
G1391303 NA non-coding upstream 134243 56323445 ~ 56323660 (+)
G1391364 NA non-coding downstream 5776 56465097 ~ 56465424 (+)
G1391358 NA non-coding downstream 12974 56472295 ~ 56473635 (+)
G1391382 NA non-coding downstream 32186 56491507 ~ 56491947 (+)
G1391383 NA non-coding downstream 35009 56494330 ~ 56495617 (+)
G1391412 NA non-coding downstream 106347 56565668 ~ 56644517 (+)
G1391254 NA other upstream 211030 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 634711 55793024 ~ 55823192 (+)
G1390527 NA other upstream 817604 55640022 ~ 55640299 (+)
G1390508 NA other upstream 825065 55628694 ~ 55632838 (+)
G1390473 NA other upstream 928255 55528593 ~ 55529648 (+)
LOC118939462 LOC106566730 other downstream 320740 56779988 ~ 56790929 (+)
G1392601 NA other downstream 906630 57365951 ~ 57366517 (+)
G1392616 NA other downstream 937619 57396940 ~ 57397177 (+)
G1392617 NA other downstream 942164 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1960065 58419386 ~ 58423502 (+)

Expression


Co-expression Network