G1391802


Basic Information

Item Value
gene id G1391802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56471731 ~ 56473616 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589486
ACGATTTTGCAGGCATTAGTTTCAAAGCTATATACCAATGAATTTTATATTACATCCTGATTAATCAGACTAACCCTCATTCAGCTTAATCTGGATTATGTTTTTTTAACATCTCATGTGCAGCTCACCTGCCGCAAAACCAATTGCCCTCTGGGACAAATAAAATGTAGACTTGAAGAATGTCTCAATTATAGATAAATCATGATATTAGTTTGTACCATTAGGGATATGGTCTCTCACATCACATGGTTCTTGTGTTGAGGGCGTGCAAATTCAGCAGCTCTGCTACTTTGAAAAAACTCTTACACCGCCACAAATGTTAACCTATTCATTCCCCATTTCATTGTTATGAAGTCTAACATTTCAAGGTAAAATGTTTACTTAATTACATTTATGTTTTGATGTTGTAATATTGTGGTAAACTCTCTCCTACAATACATTTGGCAAATTCTCATATTAAAAACACAGATTCTATGAAAGGAATAGAactatagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcataaaaaatcctacaatgtgattttctggagaaaaaaaaatctaattttgtctgtcaaagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatactttttttgccccactgtacctgctTTCGAGGATTATATAAATTTGAGTGCAATACAATTCATGGGAAGATAACCGTTTGCAGGTGTTTCTATTTATTCATTTCACTTAACATATTGTTAGCTGGTCTACTTTTGAACTCAACAGGCATTCTACACACCTTATCATTGTGCAAAACATCATTGACCTTTTATAAGGACTATCCCAATCCAGCAGCAAAAAAACTGCCCTTTAGGAGAAAGTAAGTTACACAAGACTAAACATATTCTGTAGTCTTCAGATTGCCAGCTTCATTTCATGATAAAATGGGCACATTCAGAAAAAGCATAATAATAATATCAAACTCTGTGTTGCTTTCTAAAGAGAAGAATAATATTTGTTCCTAAGAACAGGATGTTTGAACAGCTTCCTCATTAAGCCCTTTCATTGAATGGGGCCCCATGTTATCATCTTTATTGTCGAACCCTTTCAACATGATAACCCTTATTTTCTCGCAATTCGTAATAATTTTCCACAGCACAACTGCTTAATTATTCTAATTCAATACCGCAGACAAAGGATGGCTCAAGGACCCAATGGGATGTCCCCTGGAATCATTAAAGCGCAAATGGTGTCTGGTCAGAATGCAGCTACAGGAAGTGATGCTGAGTTGAGAGGGTGTCATTTAattaataaacaataaaaaataccCAGACAAATGAAATTGTATGTAGTGCCATGTACTACAATAACAATATTACATTATAGTAACAGAAACCACATTTCCCCCTTCACACTGGAACTGCACGCAGTAGGCGGTTTATTATATGGACCTGTTCTCGTTTTATTTTAATCAATTTGGCATATAATGATTGTACACAAACTCTATTGACATTGAATGGTTTTTGTACAAACATCATTCTCGGTGGCCATCTTTCAGCCTTTCCTCTTGTAGCAGGTGGTCATCCGCATCTCGGAAGTGATGTCAATCTCTATTATTTCATAAAAAAGAAAATGTCCAACTTTCATACAGAAATAACAGATTATTTGGATAACCAATGATGCAATATATCCACAAAAACACTGATTAGACCAGGTTATGTAGCCTAGAAATAAGTGTAAGGGGCACTAGCACACACGCAAGTGCTAGTGTATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589486 True 1886 lncRNA 0.35 1 56471731 56473616

Neighbor

gene id symbol gene type direction distance location
LOC110491119 LOC106566720 coding downstream 111763 56352467 ~ 56359968 (-)
LOC110491118 LOC106571944 coding downstream 133191 56322691 ~ 56338540 (-)
LOC110492371 adcy6 coding downstream 178228 56240763 ~ 56293503 (-)
LOC110492367 LOC106566716 coding downstream 234826 56231265 ~ 56236905 (-)
LOC110492369 g6pd coding downstream 250153 56206812 ~ 56221578 (-)
LOC110492378 LOC106566727 coding upstream 70026 56543642 ~ 56563898 (-)
LOC110492379 LOC106566728 coding upstream 96509 56570125 ~ 56679900 (-)
LOC110492380 LOC106566729 coding upstream 240166 56713782 ~ 56729174 (-)
col9a3 LOC106566732 coding upstream 357144 56830760 ~ 56854519 (-)
LOC110491121 ogfr coding upstream 383455 56857071 ~ 56875920 (-)
G1391826 NA non-coding downstream 12379 56459141 ~ 56459352 (-)
G1391799 NA non-coding downstream 15172 56456144 ~ 56456559 (-)
G1391796 LOC100286403 non-coding downstream 34452 56424272 ~ 56437279 (-)
G1391721 NA non-coding downstream 119744 56350987 ~ 56351987 (-)
G1391755 NA non-coding downstream 121967 56349540 ~ 56349764 (-)
G1391839 baz2a non-coding upstream 15056 56488672 ~ 56489237 (-)
G1391942 NA non-coding upstream 227649 56701265 ~ 56701492 (-)
G1391930 NA non-coding upstream 235816 56709432 ~ 56712162 (-)
G1391980 NA non-coding upstream 295291 56768907 ~ 56769150 (-)
G1391983 NA non-coding upstream 300053 56773669 ~ 56773876 (-)
G1391624 NA other downstream 245670 56225414 ~ 56226061 (-)
G1391586 NA other downstream 406869 56064503 ~ 56064862 (-)
LOC110492352 nua4l other downstream 645100 55824155 ~ 55826646 (-)
G1391869 NA other upstream 64976 56538592 ~ 56540929 (-)
LOC110492394 psma7 other upstream 1376058 57849674 ~ 57853907 (-)
LOC110492397 NA other upstream 1413875 57887491 ~ 57893319 (-)
G1393949 LOC105029132 other upstream 1731143 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1800412 58274028 ~ 58278427 (-)

Expression


Co-expression Network