G1391382


Basic Information

Item Value
gene id G1391382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56491507 ~ 56491947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589021
CAGGTATTCGGACACAGCCAGTGTGTCTAGAGTTGTCACGTCAACACTCCTGCTCCTAACACTGTTTGAAATAAGCGCTCTCTGTGTTTTTAGGGGCCtgcttttatatttttaaaatagttgtggcttaaaaaaatgtatcatttgaTGTCTGCACTCACTTACCTTACCtcacctcgcccaccttaccttACCCAACTTACcttacctcacctcgcccaccttaccttACCCAACTTACCTCACCTCGCTTACCTTACCtcacctcgcccaccttaccttacccaccttacctcacctcgcccaccttaccttACCCACCTTACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589021 True 328 lncRNA 0.47 2 56491507 56491947

Neighbor

gene id symbol gene type direction distance location
LOC110492376 baz2a coding upstream 19557 56462505 ~ 56471950 (+)
LOC110492374 ptges3 coding upstream 33787 56450915 ~ 56457720 (+)
LOC118939609 NA coding upstream 54407 56437027 ~ 56437100 (+)
LOC118939608 NA coding upstream 54838 56436596 ~ 56436669 (+)
LOC118939611 NA coding upstream 55854 56435583 ~ 56435653 (+)
LOC118939476 NA coding downstream 32972 56524919 ~ 56526061 (+)
LOC110492377 LOC106566726 coding downstream 44720 56536667 ~ 56540132 (+)
LOC110492382 LOC100195767 coding downstream 237552 56729499 ~ 56762482 (+)
LOC118939558 NA coding downstream 275699 56767646 ~ 56775078 (+)
LOC118939462 LOC106566730 coding downstream 288041 56779988 ~ 56790929 (+)
G1391358 NA non-coding upstream 17872 56472295 ~ 56473635 (+)
G1391364 NA non-coding upstream 26083 56465097 ~ 56465424 (+)
G1391363 NA non-coding upstream 32186 56457903 ~ 56459321 (+)
G1391370 NA non-coding upstream 67774 56423421 ~ 56423733 (+)
G1391327 NA non-coding upstream 129446 56360627 ~ 56362061 (+)
G1391383 NA non-coding downstream 2383 56494330 ~ 56495617 (+)
G1391412 NA non-coding downstream 73721 56565668 ~ 56644517 (+)
G1391480 NA non-coding downstream 153261 56645208 ~ 56645703 (+)
G1391483 NA non-coding downstream 155571 56647518 ~ 56647787 (+)
G1391501 NA non-coding downstream 159913 56651860 ~ 56652189 (+)
G1391254 NA other upstream 244634 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 668315 55793024 ~ 55823192 (+)
G1390527 NA other upstream 851208 55640022 ~ 55640299 (+)
G1390508 NA other upstream 858669 55628694 ~ 55632838 (+)
G1390473 NA other upstream 961859 55528593 ~ 55529648 (+)
G1392601 NA other downstream 874004 57365951 ~ 57366517 (+)
G1392616 NA other downstream 904993 57396940 ~ 57397177 (+)
G1392617 NA other downstream 909538 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1927439 58419386 ~ 58423502 (+)

Expression


Co-expression Network