G1391869


Basic Information

Item Value
gene id G1391869
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56538592 ~ 56540929 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589557
cagagttacacatggaataaacaaacatacagtcaataatacagtagaaaaaaagtctatagacagtgtatgcaaatgaggtaagataaggcaataaataggccatggtggcgaagtaattacaatataccaattaaacacgggagtgattgatgtgcagaagatgaatgtgtaagtagatatactggggtgcaaaggagcaagataaataaataaatacagtatgtggatgaggtagttggatgggctatttacagattggctatgtacaggtgcagtgatcagtCATTGgcggccaaaggaggaattggctttgggggtgaccagtgaaatatacctgctggagagagTGCTatgggcaagttggtcaggatgatatctatgaaggTGCCTgggtttacggatttggggttgtaactggtaggttcattgataatttgtgagagattgagggcatcaagcttagattgtaggatggccggggtgttatgCATGTcgcagtttaggtcacctagtagcacgagctctgaagatagatggggggcaatcaattcacatatggtgtccagggcacagctcttagaggaaaatgttatagttagagatggaaatttcagagtttttggtggtcttcctaagccaggattcagacacggctaagacatctgggttggcagagtttgctaaagcagtgaataaaacaagcgtagggaggagacttctaatgttaacatgcatgaaaccaataaTGGAGTAAACTAAACATGACACACATTTTGTATcaagtttttgtatttatttttaatttaaatatGGTTTAAACAGCTTTGTGCTCCCAAGGATCAAATCATAAAAGGAGACTCAATGAAAAGCTTACACAGCCTTTTTGCAGTGAACAGAATCAGTCCAGTCTGGGATACCTTTCCTTtgaattgtgttttttttctgaACACAAAAGCAGATGGTTTGTGTAAAAATGAATATCATAGCAAATACCACAGTGAAGGGAGGAAAAATTATAATGTCTTAAAAATTGATAATTCTATGAAACATAATCATGATACAAACAGGAGCGTAATGAAAATAAACTAAATAAATCTGCGAActcgatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagataaaattAAGTGATTTTAAAAATGAAACCTTGCTCAAATCAAATGGTTTCATACATCCACGTTTTGTGTCTGAAGTGCAGAAAACAAAATTAAACTGAAAAAATTTAGAGATAAAATCTgataaataatgaaaaaacatGCCCATCTTCATTGGTTTCAGTCCTGGGCAATTCTAGTCCACGGGGCCGGAGTGGTGTCACCCTtttccccatccctagcaaacacagctgatttaaactaattgcattcaAGCTGAAGATCTTCATTATTGGAGTCagatgtgttagctggggctggggcaaaagtgtgacaccaatcaggtcCCAGAGGACTCGAGTTGCTCAGGCCTGACTCAAATCTATACAACTAAAAACTTGGAGTGTTGCCCCTCTATTCTCACCCCAAACCCTTTACCCCATCTACACCCCAACCCTCTATCCTATACCCTTACCTCTTACCCCGACCATACTTACATACCCACCTATACCTCACCCTCACCCCCCTACCTGCATACCCCTCCCCTAGTTTTCCTGCTAGACACAGGGTTCACATGCTTCTGTGCTGACAGGTCTGGTCCTtcagtctgtgtgggtgtgtgaggggAAGACTCTGTgtggctgaggaggaggagaggggaggtagtGGGACTGTTGGAGCAGGCACTGGTCACCTCTATCAAACACCATGTCCAGTTCAGGATACAGAGTGAGGTTGGAAGCAGAGGAGTCTCGTTGCATATTGAGGTTGAAGGTTGTGAACCTgtctgtgtctgggtgtgtgtacAGTTTATGCATCAATATATGTCTGAATCTGCATGTGCCTGTGTGTTAGTTAGTGAGTCAATGAGAGGGACTGTGTATGTGCTCATGGGATGGGGCCAGCGTGGGGGTTGGCGGACACAGGGCCTGTCCCTTGTCTCCAGACATGGGCAGGTTTATAGGGATTGTGTCTTGAGCTCGATGGGCTCCCCACGGTTGTCCTGCTGGGTCTCCGTCTCGGGGGGTCGGCTGCCCTTCAGTGTGGCCAGGCGCTCAGACAGACCACGCATACGGGGGAACAGCATGAAATCGTACAGAAGAGCTCCCATAGCACCTCCTATCATGGGACCCACCCAGTACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589557 True 2315 TUCP 0.44 2 56538592 56540929
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110491119 LOC106566720 coding downstream 178624 56352467 ~ 56359968 (-)
LOC110491118 LOC106571944 coding downstream 200052 56322691 ~ 56338540 (-)
LOC110492371 adcy6 coding downstream 245089 56240763 ~ 56293503 (-)
LOC110492367 LOC106566716 coding downstream 301687 56231265 ~ 56236905 (-)
LOC110492369 g6pd coding downstream 317014 56206812 ~ 56221578 (-)
LOC110492378 LOC106566727 coding upstream 2713 56543642 ~ 56563898 (-)
LOC110492379 LOC106566728 coding upstream 29196 56570125 ~ 56679900 (-)
LOC110492380 LOC106566729 coding upstream 172853 56713782 ~ 56729174 (-)
col9a3 LOC106566732 coding upstream 289831 56830760 ~ 56854519 (-)
LOC110491121 ogfr coding upstream 316142 56857071 ~ 56875920 (-)
G1391839 baz2a non-coding downstream 49355 56488672 ~ 56489237 (-)
G1391802 NA non-coding downstream 64976 56471731 ~ 56473616 (-)
G1391826 NA non-coding downstream 79240 56459141 ~ 56459352 (-)
G1391799 NA non-coding downstream 82033 56456144 ~ 56456559 (-)
G1391796 LOC100286403 non-coding downstream 101313 56424272 ~ 56437279 (-)
G1391942 NA non-coding upstream 160336 56701265 ~ 56701492 (-)
G1391930 NA non-coding upstream 168503 56709432 ~ 56712162 (-)
G1391980 NA non-coding upstream 227978 56768907 ~ 56769150 (-)
G1391983 NA non-coding upstream 232740 56773669 ~ 56773876 (-)
G1391985 NA non-coding upstream 233555 56774484 ~ 56774800 (-)
G1391624 NA other downstream 312531 56225414 ~ 56226061 (-)
G1391586 NA other downstream 473730 56064503 ~ 56064862 (-)
LOC110492352 nua4l other downstream 711961 55824155 ~ 55826646 (-)
LOC110492394 psma7 other upstream 1308745 57849674 ~ 57853907 (-)
LOC110492397 NA other upstream 1346562 57887491 ~ 57893319 (-)
G1393949 LOC105029132 other upstream 1663830 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1733099 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1761582 58302511 ~ 58315644 (-)

Expression

G1391869 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 0.3.
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G1391869 Expression in each Bioproject

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G1391869 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 10.
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Co-expression Network