G1391412


Basic Information

Item Value
gene id G1391412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56565668 ~ 56644517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589057
tctacggacaattccttcgacctcatggcttggtttttgttctgacatgcactgtcaactgtgagaccttatatagacaggtgtgtgcctttccaaataatctccattcaattgaattgaaATCAAGacgtagaaacatctgaaggatgatcaatggaaacaggatgcacctgagctcaatttcatgtctcatagcaaagggtctgaatacttatgtaaataaggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589057 True 226 lncRNA 0.39 2 56565668 56644517

Neighbor

gene id symbol gene type direction distance location
LOC110492377 LOC106566726 coding upstream 25536 56536667 ~ 56540132 (+)
LOC118939476 NA coding upstream 39607 56524919 ~ 56526061 (+)
LOC110492375 baz2a coding upstream 57673 56474410 ~ 56507995 (+)
LOC110492376 baz2a coding upstream 93718 56462505 ~ 56471950 (+)
LOC110492374 ptges3 coding upstream 107948 56450915 ~ 56457720 (+)
LOC110492382 LOC100195767 coding downstream 84982 56729499 ~ 56762482 (+)
LOC118939558 NA coding downstream 123129 56767646 ~ 56775078 (+)
LOC118939462 LOC106566730 coding downstream 135471 56779988 ~ 56790929 (+)
si:ch73-181d5.4 LOC106566730 coding downstream 146266 56790783 ~ 56820445 (+)
LOC110492385 LOC106566733 coding downstream 181270 56825787 ~ 56830593 (+)
G1391383 NA non-coding upstream 70051 56494330 ~ 56495617 (+)
G1391382 NA non-coding upstream 73721 56491507 ~ 56491947 (+)
G1391358 NA non-coding upstream 92033 56472295 ~ 56473635 (+)
G1391364 NA non-coding upstream 100244 56465097 ~ 56465424 (+)
G1391363 NA non-coding upstream 106347 56457903 ~ 56459321 (+)
G1391480 NA non-coding downstream 691 56645208 ~ 56645703 (+)
G1391483 NA non-coding downstream 3001 56647518 ~ 56647787 (+)
G1391501 NA non-coding downstream 7343 56651860 ~ 56652189 (+)
G1391502 NA non-coding downstream 9125 56653642 ~ 56654060 (+)
G1391504 NA non-coding downstream 10823 56655340 ~ 56660372 (+)
G1391254 NA other upstream 318795 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 742476 55793024 ~ 55823192 (+)
G1390527 NA other upstream 925369 55640022 ~ 55640299 (+)
G1390508 NA other upstream 932830 55628694 ~ 55632838 (+)
G1390473 NA other upstream 1036020 55528593 ~ 55529648 (+)
G1392601 NA other downstream 721434 57365951 ~ 57366517 (+)
G1392616 NA other downstream 752423 57396940 ~ 57397177 (+)
G1392617 NA other downstream 756968 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1774869 58419386 ~ 58423502 (+)

Expression


Co-expression Network