G1391501


Basic Information

Item Value
gene id G1391501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56651860 ~ 56652189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589167
gtatttttgggcgccgatttccgattattattatttattttttaaattccatttatttaactaagcaagtcagttaagaacacattcttattttcaatgactgcctaggaactgtgggttaactgccttgttcaggggcagaatgacagattttcaccttgtcagctcaggggttccaatcttgcaaccgcacagttaactagttcaacgctctaaccattccacgagtagcctgcctgttacgcgaatgtagtaaaagccaaggtaaattgctagctagcattaaacttatctgaTAAAAAACAATtcatcataatcactagttataac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589167 True 330 lncRNA 0.37 1 56651860 56652189

Neighbor

gene id symbol gene type direction distance location
LOC110492377 LOC106566726 coding upstream 111728 56536667 ~ 56540132 (+)
LOC118939476 NA coding upstream 125799 56524919 ~ 56526061 (+)
LOC110492375 baz2a coding upstream 143865 56474410 ~ 56507995 (+)
LOC110492376 baz2a coding upstream 179910 56462505 ~ 56471950 (+)
LOC110492374 ptges3 coding upstream 194140 56450915 ~ 56457720 (+)
LOC110492382 LOC100195767 coding downstream 77310 56729499 ~ 56762482 (+)
LOC118939558 NA coding downstream 115457 56767646 ~ 56775078 (+)
LOC118939462 LOC106566730 coding downstream 127799 56779988 ~ 56790929 (+)
si:ch73-181d5.4 LOC106566730 coding downstream 138594 56790783 ~ 56820445 (+)
LOC110492385 LOC106566733 coding downstream 173598 56825787 ~ 56830593 (+)
G1391483 NA non-coding upstream 4073 56647518 ~ 56647787 (+)
G1391480 NA non-coding upstream 6157 56645208 ~ 56645703 (+)
G1391412 NA non-coding upstream 7343 56565668 ~ 56644517 (+)
G1391383 NA non-coding upstream 156243 56494330 ~ 56495617 (+)
G1391382 NA non-coding upstream 159913 56491507 ~ 56491947 (+)
G1391502 NA non-coding downstream 1453 56653642 ~ 56654060 (+)
G1391504 NA non-coding downstream 3151 56655340 ~ 56660372 (+)
G1391505 NA non-coding downstream 8396 56660585 ~ 56660988 (+)
G1391515 NA non-coding downstream 23338 56675527 ~ 56675833 (+)
G1391530 NA non-coding downstream 41785 56693974 ~ 56694194 (+)
G1391254 NA other upstream 404987 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 828668 55793024 ~ 55823192 (+)
G1390527 NA other upstream 1011561 55640022 ~ 55640299 (+)
G1390508 NA other upstream 1019022 55628694 ~ 55632838 (+)
G1390473 NA other upstream 1122212 55528593 ~ 55529648 (+)
G1392601 NA other downstream 713762 57365951 ~ 57366517 (+)
G1392616 NA other downstream 744751 57396940 ~ 57397177 (+)
G1392617 NA other downstream 749296 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1767197 58419386 ~ 58423502 (+)

Expression


Co-expression Network