G1391515


Basic Information

Item Value
gene id G1391515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56675527 ~ 56675833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589183
gtggagtgctgcagagatggttgtcctggaaggttctcccatctccacagaggaactctagagctctgttagagtgaccatctggttcatggtcccctccctgaccaaggcccttctttcccgattgctcagtttggccaggtggccagctctatgaagagtcttggtggttccaaacttcttccatttaagaatgatggaggccactgtgttcttggggaccttcagtgctgcataaatgttttggtacccttccccaaatctgtgctgacacaatcctgtctctgagctctacagacatttcctt

Function

NR:

description
centrin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589183 True 307 lncRNA 0.50 1 56675527 56675833

Neighbor

gene id symbol gene type direction distance location
LOC110492377 LOC106566726 coding upstream 135395 56536667 ~ 56540132 (+)
LOC118939476 NA coding upstream 149466 56524919 ~ 56526061 (+)
LOC110492375 baz2a coding upstream 167532 56474410 ~ 56507995 (+)
LOC110492376 baz2a coding upstream 203577 56462505 ~ 56471950 (+)
LOC110492374 ptges3 coding upstream 217807 56450915 ~ 56457720 (+)
LOC110492382 LOC100195767 coding downstream 53666 56729499 ~ 56762482 (+)
LOC118939558 NA coding downstream 91813 56767646 ~ 56775078 (+)
LOC118939462 LOC106566730 coding downstream 104155 56779988 ~ 56790929 (+)
si:ch73-181d5.4 LOC106566730 coding downstream 114950 56790783 ~ 56820445 (+)
LOC110492385 LOC106566733 coding downstream 149954 56825787 ~ 56830593 (+)
G1391505 NA non-coding upstream 14539 56660585 ~ 56660988 (+)
G1391504 NA non-coding upstream 15155 56655340 ~ 56660372 (+)
G1391502 NA non-coding upstream 21467 56653642 ~ 56654060 (+)
G1391501 NA non-coding upstream 23338 56651860 ~ 56652189 (+)
G1391483 NA non-coding upstream 27740 56647518 ~ 56647787 (+)
G1391530 NA non-coding downstream 18141 56693974 ~ 56694194 (+)
G1391532 NA non-coding downstream 21671 56697504 ~ 56697731 (+)
G1391536 NA non-coding downstream 25734 56701567 ~ 56701902 (+)
G1391540 NA non-coding downstream 32544 56708377 ~ 56708669 (+)
G1391562 NA non-coding downstream 98122 56773955 ~ 56774163 (+)
G1391254 NA other upstream 428654 56246515 ~ 56247620 (+)
G1390616 LOC106566696 other upstream 852335 55793024 ~ 55823192 (+)
G1390527 NA other upstream 1035228 55640022 ~ 55640299 (+)
G1390508 NA other upstream 1042689 55628694 ~ 55632838 (+)
G1390473 NA other upstream 1145879 55528593 ~ 55529648 (+)
G1392601 NA other downstream 690118 57365951 ~ 57366517 (+)
G1392616 NA other downstream 721107 57396940 ~ 57397177 (+)
G1392617 NA other downstream 725652 57401485 ~ 57402530 (+)
G1393570 LOC106566761 other downstream 1743553 58419386 ~ 58423502 (+)

Expression


Co-expression Network