Gene
RNA
| Item | Value |
|---|---|
| gene id | G1391980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 56768907 ~ 56769150 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1589680 | True | 244 | lncRNA | 0.37 | 1 | 56768907 | 56769150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492380 | LOC106566729 | coding | downstream | 39733 | 56713782 ~ 56729174 (-) |
| LOC110492379 | LOC106566728 | coding | downstream | 89007 | 56570125 ~ 56679900 (-) |
| LOC110492378 | LOC106566727 | coding | downstream | 205009 | 56543642 ~ 56563898 (-) |
| LOC110491119 | LOC106566720 | coding | downstream | 408939 | 56352467 ~ 56359968 (-) |
| LOC110491118 | LOC106571944 | coding | downstream | 430367 | 56322691 ~ 56338540 (-) |
| col9a3 | LOC106566732 | coding | upstream | 61610 | 56830760 ~ 56854519 (-) |
| LOC110491121 | ogfr | coding | upstream | 87921 | 56857071 ~ 56875920 (-) |
| LOC118939559 | NA | coding | upstream | 107148 | 56876298 ~ 56877789 (-) |
| LOC110492388 | LOC106566734 | coding | upstream | 146509 | 56915659 ~ 56937661 (-) |
| LOC110492390 | taf4 | coding | upstream | 1064299 | 57833449 ~ 57845200 (-) |
| G1391930 | NA | non-coding | downstream | 56745 | 56709432 ~ 56712162 (-) |
| G1391942 | NA | non-coding | downstream | 67415 | 56701265 ~ 56701492 (-) |
| G1391839 | baz2a | non-coding | downstream | 279670 | 56488672 ~ 56489237 (-) |
| G1391802 | NA | non-coding | downstream | 295291 | 56471731 ~ 56473616 (-) |
| G1391826 | NA | non-coding | downstream | 309555 | 56459141 ~ 56459352 (-) |
| G1391983 | NA | non-coding | upstream | 4519 | 56773669 ~ 56773876 (-) |
| G1391985 | NA | non-coding | upstream | 5334 | 56774484 ~ 56774800 (-) |
| G1392017 | NA | non-coding | upstream | 56152 | 56825302 ~ 56825578 (-) |
| G1392043 | NA | non-coding | upstream | 99848 | 56868998 ~ 56869342 (-) |
| G1392049 | NA | non-coding | upstream | 101948 | 56871098 ~ 56871301 (-) |
| G1391869 | NA | other | downstream | 227978 | 56538592 ~ 56540929 (-) |
| G1391796 | LOC100286403 | other | downstream | 331628 | 56424272 ~ 56437279 (-) |
| LOC110492371 | adcy6 | other | downstream | 475435 | 56240763 ~ 56293503 (-) |
| G1391624 | NA | other | downstream | 542846 | 56225414 ~ 56226061 (-) |
| G1391586 | NA | other | downstream | 704045 | 56064503 ~ 56064862 (-) |
| LOC110492394 | psma7 | other | upstream | 1080524 | 57849674 ~ 57853907 (-) |
| LOC110492397 | NA | other | upstream | 1118341 | 57887491 ~ 57893319 (-) |
| G1393949 | LOC105029132 | other | upstream | 1435609 | 58204759 ~ 58207165 (-) |
| G1393997 | LOC106566752 | other | upstream | 1504878 | 58274028 ~ 58278427 (-) |
| LOC110492410 | LOC106566756 | other | upstream | 1533361 | 58302511 ~ 58315644 (-) |
